Mycolicibacterium madagascariense: MMAD_37160
Help
Entry
MMAD_37160 CDS
T06841
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAD_37160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmag03019
]
MMAD_37160
03009 Ribosome biogenesis [BR:
mmag03009
]
MMAD_37160
Enzymes [BR:
mmag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MMAD_37160
Messenger RNA biogenesis [BR:
mmag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMAD_37160
Ribosome biogenesis [BR:
mmag03009
]
Prokaryotic type
rRNA processing factors
MMAD_37160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBZ29421
UniProt:
A0A7I7XJQ0
LinkDB
All DBs
Position
complement(3899381..3902053)
Genome browser
AA seq
890 aa
AA seq
DB search
MADDDFAAPFDLPEAPRRDEGLPAPLSQDYVADVFAVPVAESAQALEVEPEPPPVPEPLP
PTTAPAAYMPLFVAPQPVAFVAPRVVEDVEDADDDEDDDEDDSDADDDQGDRPANRRRRR
GRRGRGRGRGEQSSDDEGDGDGDDSEQATSEDGSDDDGDDEDGPDDESAGGDGATRRRRR
RRRRKTGGGDGDGDDAASPDDPPNTVVHERQPREKKPAKENNEIQGIAGSTRLEAKRQRR
RDGRDAGRRRPPILSEAEFLARREAVERVMVVRDRIRTEPPHEGSRYTQIAVLEDGVVVE
HFVTSASSASLVGNVYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGAQRK
IEQALKPGDYVIVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQR
LKEILREVVPNDAGVIIRTASEGVKEEDIRSDVTRLQERWNQIEAKGAEITAKAAGAAVP
LYEEPDVLVKVIRDLFNEDFSGLIVSGDEAWNTINDYVTSVAPELLPRMTKYEPAAKNGP
DVFAVHRIDEQLTKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRN
NLEAAEETVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSL
GLVQLTRKKLGTGLIEAFSTTCPHCAGRGLVLHGDPVDSNSTAGRRSEPGTGRRSKRGKK
GGRTEDEVQVAKVPVHAAGEHPMFRAMAAATGRDEDADDTEDAEGTDAADDAVVGGSEDL
ASAESAEEVLAEDDLDDEDDSDEDDDDSDEDDDDSDDDDEDIEVIDDDDLDDEDDSDDED
SDEDSDEEDSDEDSDDEDDSDEDEDDEPMVAAVGRPRRRRAAARPAGPPV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacgatgattttgccgccccattcgaccttccggaagcgcctcggcgcgacgag
ggcctgccagcgccgctgagccaggactacgtcgccgacgtgttcgcggtgcccgtcgcc
gagtcggcacaggcactggaggtcgaaccggagccgccgcccgtgccggaaccgctgccg
cccaccacggcgccggcggcctacatgccgctgttcgtcgcgccccagccggtcgccttc
gtcgcgccccgcgtggtggaggacgtcgaggacgccgacgacgacgaggacgacgacgag
gacgattcggacgccgacgacgaccagggcgatcggccggccaaccgccgccgccgccgg
ggccgccggggtcgcggacgtggacgcggcgagcagagctccgacgacgagggcgacggc
gacggcgacgactccgagcaggccacgtccgaggacggctcggacgacgacggtgacgac
gaggacgggcccgacgacgagagtgcgggcggtgacggcgcgacccgtcggcgccggcgg
cgcaggcggcgcaagaccggtgggggcgacggtgacggcgacgacgcggcgtcgcccgac
gacccgcccaacacggtcgtccacgagcgtcagccgcgggagaagaagcccgccaaggag
aacaacgagatccagggcatcgccgggtccacgcggctggaggccaagcgccagcgtcgc
cgcgacggacgcgacgcgggccgacgccgtccgcccatcctgagcgaggccgagttcctg
gccaggcgcgaggccgtcgagcgcgtcatggtcgtgcgcgacaggatccgcaccgagccg
ccgcacgagggctcccggtacacccagatcgccgtcctcgaagacggcgtcgtcgtcgag
cacttcgtcaccagcgcgtcgtcggcgtccctcgtcggcaacgtctacctcggcatcgtg
cagaacgtgctgccgtcgatggaggcggccttcgtcgacatcggccgcggccgcaacggc
gtgctctacgccggtgaggtgaactgggaggcggcgggcctcggcggcgcgcagcgcaag
atcgagcaggcgctcaagccgggcgactacgtcatcgtccaggtcagcaaggatcccgtc
ggccacaagggggcccggctcaccacgcaggtgtccctcgccgggcggtacctggtctac
gtgcccggcgcgtcctcgaccggtatcagccgcaagctgcccgacaccgagcggcagcgt
ctgaaggagatcctgcgcgaagtcgtgccgaacgatgcgggcgtcatcatccgcaccgcg
tcggagggcgtgaaggaagaggacatccgcagtgacgtcacccggctgcaggagcggtgg
aaccagatcgaggccaagggcgcggagatcacggccaaggccgccggtgccgcggtgccg
ctctacgaagagcccgacgtgctggtcaaggtcatccgcgatctgttcaacgaggacttc
agcggcctgatcgtgtccggtgacgaggcgtggaacaccatcaacgactacgtgacgtcg
gtggctccggagctcctcccgcggatgacgaagtacgagcccgctgccaagaacggaccg
gacgtgttcgcggtgcaccgcatcgacgagcagctgaccaaggcgatggaccgcaaggtg
tggctgccctcgggcggcacgctggtcatcgaccgcaccgaggcgatgacggtcgtcgac
gtcaacaccggcaagttcaccggctccggcggcaacctcgagcagaccgtcacccgcaac
aacctggaggccgccgaggagaccgtgcgccaactccggttgcgcgacatcggcggcata
atcgtcatcgacttcatcgacatggtgctggagtccaaccgcgatctggtcctgcgccgc
ctgaccgaggcgctcgcgcgggaccgcacccgtcaccaggtctccgaggtgacgtcgctg
ggactggtccagctgacccggaagaagctcggcacgggtctcatcgaggccttctcgacc
acgtgtccgcattgcgcgggccgcggtctggtgctgcacggtgacccggtggactccaac
tccaccgcgggccgccggagcgaacccggcacggggcgtcgcagcaagcgcggcaagaag
ggtggccgcaccgaggacgaggttcaggtggccaaggtgcccgtgcacgcggcgggtgag
cacccgatgttccgcgcgatggccgcggccaccgggcgcgacgaggacgccgacgacacc
gaggacgccgaaggcaccgacgcggccgacgacgccgtcgtcgggggttcggaggacctg
gcgtccgccgaatcggccgaggaggtgctggccgaggacgacctcgacgacgaggacgat
tcggacgaggacgacgacgactcggacgaggacgacgacgactcggacgatgacgacgag
gacatcgaagtcatcgacgacgacgacctcgacgacgaggacgactcggacgacgaagat
tcggacgaggactccgacgaggaagattcggacgaggactccgacgacgaagacgactcg
gacgaggacgaggacgacgagccgatggtcgccgcggtgggacgcccgcgccggcggcgc
gccgccgcacgtccggcgggtccgccagtttga
DBGET
integrated database retrieval system
