Mercenaria mercenaria (northern quahog): 123524251
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Entry
123524251 CDS
T07835
Name
(RefSeq) protein patched homolog 1-like isoform X2
KO
K06225
patched 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
123524251
NCBI-ProteinID:
XP_045158248
EnsemblRapid:
LOC123524251
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All DBs
Position
3:complement(82454538..82531943)
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AA seq
1160 aa
AA seq
DB search
MFDLQWKFRDLCYLAQFPMFEDSLIDNTLEQILPCVVMSPLDCFWEGAQVLGPQNFHLSG
FVQLRWINLNPLELVQKMKEDFPDGDMMEEVLLKSGISSGYQEKPCIDPTDPDCPDTAPN
KVSQQEPDFGAELTGGCYGFATKYMHWDEDLIVGGVRKNQSGHIVRAEALQSVFLLMGES
QMYEYWKKDYKTTGIDWTQERARMVLEAWHRKFTDTMNGFNNDTMTDNMYGFSMTSLMDI
MKEFSSISIPRVAIGYILMLFYACVTLLRWNNVIQSQSGIGIAGVLLVALAVAAGLGICS
ILGIAFNASTTQIIPFLALGLGVNDMFLITHTYAENANNDNIPFKEQTAECLKRTGTTVL
LTSVSNMLAFFSAVIIPIPALRVFCIQAGILILFNLVAVLLIYPAICSLDLKRKKNKRVD
VFCCFESYGDNNTVIELQPHINVHDPVDRELSPPPGYSPPSYHPPPYSDLLARDMIAQSS
TDGGHAQTVLAPHEGQFVTRCGSPIPFSTYDTANNNSRQCLTDGDTVTCKERFAKLQKAC
LTTSLTALAVNKYAPFLQKTPVKVFTSIFFIVILIIGIWGTAQVKDGLDLTDVVPRDTYE
YSFLENQSKYFGFYSIYLVTKDADYPNNQRLLREYHRSFQNVDKILKEKDGSLPTFWLDT
FRDWLVGLQAAFDRDYANGTFHKNGWYLNASDDAVLAYKLLAQTGNPDNSVDETQITKTR
LVNAEGIIYPPAFYNYLTVWISNDGLAYSYSMGEIRPETQSWPHDPYDMDMKIPKAKNII
YAQVPFYLSRLSDTEEILDIVLQIRSICDDFTSRGLPNYPSGIPFTFWEQYIKLRFYLML
ALLCILVVTFTVLSVVLVNPWLAAIIVVIVSLILVELFGFMGILGLKLSAIPAVILIVSV
GIGVEFTVHVSVGFLSSIGTRNDRMLMALEHTFAPVVHGAISTFLGIIMLAGAEFDFIVR
YFFLVLTGLVLIGLLNGLVLLPVILSVFGPPSEVRPKENDERIPTPSPESSPRARIRNLP
VRATRQSRKMKYPRRIPSDISLTTISEEPSQYSSTEIVVQPEVVVETSLQQPKDGNSQQQ
TLPNAADDSSSTKSSSKNNSPPGSIVSAPATHVTRVKATATVKVEVHTPLPGTVPELQDY
KRRRRKDNTDSSNSDSDSSS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatctccaatggaaattccgagacctttgctacctggcacagtttcccatgttc
gaagatagcttaattgacaatacattggaacaaattctgccttgtgttgtgatgtcacca
cttgactgtttttgggaaggtgcacaagttcttggaccacaaaacttccatttaagtggt
tttgtgcaactgagatggatcaacctgaacccgcttgagctggtacagaaaatgaaagag
gattttcctgacggcgatatgatggaggaagtcttattgaagtcagggatatcttctggg
taccaagaaaaaccatgcatcgatcctactgatcctgattgtcccgatacagccccaaac
aaagtgtcgcagcaggagccagacttcggggcagaactaacaggtggttgctatggtttc
gcaaccaagtacatgcactgggatgaggacctaatagtgggcggggtaaggaagaaccag
tcaggtcacattgtaagagctgaggccctccagtctgtcttcttgttgatgggagaaagc
cagatgtacgaatactggaagaaggactacaagaccactggtattgactggacacaggaa
agagcaagaatggttctagaggcctggcatagaaaatttacagatacaatgaacggtttt
aacaatgacacaatgacggacaatatgtacggattctcaatgacatcactgatggacata
atgaaggagttttccagcatcagtattccacgtgttgccattggttacatccttatgttg
ttttatgcttgtgtaacactactacgctggaacaatgtgatacagtcccaaagtggtatt
ggtatcgctggtgttctcctagtggctttagccgtagctgcaggactcgggatttgttcg
atccttggcattgctttcaacgcttcaaccacacagataataccattcttagcactcgga
cttggcgtcaacgatatgttccttataacacatacatatgccgagaatgccaataacgac
aatattccatttaaggaacagacagcagagtgccttaaaaggacaggaacgacagtattg
cttacgtcagtcagtaacatgctggctttcttcagtgctgttatcattcctatcccggct
cttcgggtcttctgcatacaggctggtatcctgatactgttcaacttggtggcagtgcta
ttgatttatcctgccatctgtagccttgaccttaaacgaaagaagaacaagagagttgat
gttttctgttgctttgaaagttatggtgataataatacagtaatagaactgcagccacac
ataaacgtacacgatcctgtggatcgcgagttgtctccgcctcctggttacagcccacca
tcatatcatccaccaccgtacagtgaccttctggcgcgtgatatgattgcccagtcatcc
accgatggtggacacgcgcaaacagttctagctccacatgaagggcagttcgtgacaaga
tgcggatctcctataccattttcaacttatgacacagcaaacaacaattcacggcagtgt
ttaacagacggcgataccgtgacgtgtaaagaacgttttgcaaaattgcagaaagcatgt
ctcaccacatcactgactgctttagcggtgaataaatacgcaccatttctacaaaagact
ccagttaaagtgttcactagtattttctttattgttatattgatcattggaatctggggt
accgcccaggtgaaagacggtctggatttgaccgatgttgtgccgcgggacacatatgaa
tatagtttcttagaaaaccaatcaaaatattttggattttatagtatatatcttgtgact
aaagacgctgattatccgaataaccaaagactattgagggagtaccatcgctcatttcaa
aatgtcgataagatattgaaggagaaagatggctctctgccaactttctggctcgacacc
ttcagggactggcttgttggtttacaagctgcgtttgacagagactatgcaaatggcaca
tttcataaaaacgggtggtacttaaatgcatcagacgatgctgttttagcttataaactt
cttgcccagacgggcaatccagataactctgtagatgaaacacaaataacgaaaacccgt
ctggtcaatgcagagggcattatttatccgcccgcgttctataattacctcacagtttgg
atatcaaatgatgggctggcgtattcatactcaatgggagagattcgaccggaaacgcag
tcttggccacatgatccatacgatatggatatgaaaattccaaaggcaaagaacatcatc
tacgcacaagtgccattttatttatcgagactgtcggacacggaggagatcctcgatata
gttcttcagattcgatcaatctgtgacgactttacgtcacgtggactccctaattaccct
agcggtatcccatttacattctgggagcagtatataaagttacgattctacctcatgttg
gcacttttgtgtattctggtggtgacattcaccgttttgtcggttgtactcgtcaaccct
tggttggctgcaatcattgttgtaattgtttcgctgatactggtggaactgttcggattt
atgggtattttaggtctcaaactcagcgctataccagcggtcatactgatcgtcagtgtg
gggattggtgtcgaattcacagtccatgtctctgtggggtttctgtcatccatcggaacc
agaaatgaccgaatgttaatggccctggagcacacatttgctccggtggttcatggagca
atatcaacgttccttgggataataatgctggctggtgccgagtttgattttattgtcagg
tattttttcctggtgttgacagggttagtgctgattgggctgttaaacggactggttcta
ctgccagttatattgtctgtgtttggaccaccttcagaggttcggcctaaagaaaacgat
gaaagaattcctacaccatctccggagtcttctcctcgagccagaatcagaaatttacct
gtacgggctacaaggcaaagcaggaagatgaaatatccgaggagaattccatcagatata
tcgttaacgacaatttccgaggaaccatcacagtattcttcgacagaaattgtcgttcaa
ccggaggtggtggtagagacgtcacttcagcaaccaaaagatggtaacagtcagcagcag
acactaccaaatgctgcagacgacagtagtagcactaaaagtagtagtaaaaataattct
ccaccagggtcgattgtgtcggcaccggctacacatgtaacacgggtaaaagcaacagcg
actgtgaaggttgaagttcacacacctttaccaggtacagttccagagttacaggattat
aaacgacggaggcggaaggacaacacagatagcagtaactcagactctgattccagttcc
taa
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