Mus pahari (shrew mouse): 110317837
Help
Entry
110317837 CDS
T05929
Symbol
Lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpah03016
]
110317837 (Lcmt2)
Enzymes [BR:
mpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
110317837 (Lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
110317837 (Lcmt2)
Transfer RNA biogenesis [BR:
mpah03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110317837 (Lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_4
Kelch_3
Kelch_2
Kelch_6
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
110317837
NCBI-ProteinID:
XP_021048314
Ensembl:
MGP_PahariEiJ_G0025624
LinkDB
All DBs
Position
3:complement(104570227..104572355)
Genome browser
AA seq
684 aa
AA seq
DB search
MGPRSRQRRAGTVQSTNDSSSLSKRSLAAHGYVRDPFAALLVPGPVRRTPLIHRGYYVRA
RAVRHGVRAFLELTGALPSPTRAQILSLGSGSDSLYFRLKAAGLLARAAVWEVDFPDVSR
LKAKRIEETPELRAQTGPFKIGDSASTLCFESADYRILGADLRELQRLGEALDGAGLDVT
SPTLLLAEAVLTYLEPSSAAALIAWAAQRFSDALFVIYEQMRPGDAFGQIMLQHFRRLHS
PLHGLELFPDVEAQCQRFLQAGWTACSALDLNEFYRRLLPADERQRVETLEPFDEYEEWH
LKCSHYFILAASKGDILSETPVFLPAEASFQIDPASPSGFLSARVVTSDHQHSSLKRYGH
TSVLLSPGVIFSAGGFGEHEGRHCRVSRFHLLSRSCDTDWKGCQISTLGTEGQWDGRLYH
TMTRLSDTQVLVLGGRLSPVSPASGALQLDLYKSEDNCPEGQNVIVTKAALEGSVLRWRH
STTEVYYQNQRYLFVYGGRSVTEPVLSDCLFLHVETMAWVRIPVRGTSPEGRHSHSACSW
QGGALIAGGLGASEEPLSSVLFLRPMSSGFLWESIDIQPPITPRYSHTAHVFNRKLLLVG
GVWIHSSSTPGVTVICLTTGLSSEYQIDTASVPWPLMLHNHSSTLLPEEQQLLLIGGGGN
CFSFGTYFNPHTVALDLSSLRSGQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgaagccgccagcgccgggcgggaacggtccagagcaccaacgacagcagc
tccctgagcaagcgatcgctagccgcacacgggtacgtgcgcgatcccttcgcggcgctg
ctggtcccggggcccgtgcggcgcacgccgcttatccaccgcggctactacgtgcgcgca
cgcgccgtgcgtcacggcgtgcgcgccttcctcgaactcactggcgcgctcccgtccccg
accagagcccagatcctgtccttgggctcaggctccgactcgctttattttcgtctgaaa
gccgcgggcctcctggcccgagctgccgtctgggaggtggacttcccggacgtgtctcgg
ctcaaggcgaagaggatcgaggagaccccggagttgcgtgcgcagaccggtcctttcaag
atcggggactcggcgtcaactctgtgcttcgagagcgcggactaccgcatcctgggcgcc
gacctgcgggagctccagcgattaggagaggccctggacggcgccggcctggacgtcacc
tctcccacgctgctcctggccgaggcggtgctgacctacctggagccctccagtgccgca
gcgctcattgcctgggccgcccagcgtttctccgacgcccttttcgtgatctatgagcag
atgcggccgggggatgcctttgggcagatcatgctgcagcactttcggcggttgcactca
cccctgcatggcctggagctctttcccgatgtggaggcccagtgccagcgcttccttcaa
gctggctggacggcctgcagcgctctggacctgaacgagttctatcgccgccttctcccg
gcagatgagcgccagcgggttgagacgcttgaaccctttgatgaatatgaggagtggcat
ctgaagtgttcccactatttcatcctggcagcatcgaagggagacattctgtcagaaact
ccagtgtttctgcccgcagaggcttcttttcagatagatcctgcttcgccttcagggttt
ctctctgccagagtagtcactagtgaccaccagcactcaagcctgaagcgatatggccac
acctctgtcctcttgagccctggcgttattttcagtgcaggaggctttggagaacatgag
ggacgccactgccgagtgagcaggtttcacttgctctccagatcctgtgacacggactgg
aaaggctgccaaataagtaccttggggactgaaggccagtgggatggacgcctttaccac
accatgacaaggctttctgatactcaggttctggttcttggagggagactctccccagta
agtccagcctctggggctctccaacttgatttatacaaaagtgaggataattgccctgaa
ggccaaaatgtaatagtaacaaaggctgccttggaaggttccgtgttacgttggcggcat
tcaacaacggaagtatactatcagaatcaaagatacttatttgtgtatggtggccgaagt
gtgactgaacctgtactaagtgactgtctttttctacatgtagagacaatggcttgggtc
agaatcccagtacgaggcacatcacccgaaggtcggcattcccatagcgcctgcagttgg
caagggggagcacttatcgctggaggtcttggggcttctgaggaaccgttgagctctgta
ctctttctcagaccaatgtcctctggattcctctgggaatcaatagatatccagcccccc
attaccccaaggtactctcacacggctcatgtgtttaatagaaagctgctgctggttgga
ggggtctggattcattcctcctcaactcctggagtgactgttatctgtttgactacaggg
ttgagctctgaatatcagattgacacagcgtctgtgccgtggccattaatgttgcacaac
cacagcagcaccctccttcctgaagagcagcagctcctacttattggaggtggagggaac
tgcttctcctttggtacttatttcaacccccacacagtggcattagacctttcttcctta
cgttcagggcaataa
DBGET
integrated database retrieval system
