Mycobacterium stephanolepidis: MSTE_01606
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Entry
MSTE_01606 CDS
T05257
Name
(GenBank) putative ribonuclease E Rne
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mste
Mycobacterium stephanolepidis
Pathway
mste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSTE_01606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mste03019
]
MSTE_01606
03009 Ribosome biogenesis [BR:
mste03009
]
MSTE_01606
Enzymes [BR:
mste01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MSTE_01606
Messenger RNA biogenesis [BR:
mste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MSTE_01606
Ribosome biogenesis [BR:
mste03009
]
Prokaryotic type
rRNA processing factors
MSTE_01606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BAX96926
UniProt:
A0A1Z4EVD5
LinkDB
All DBs
Position
1594399..1597251
Genome browser
AA seq
950 aa
AA seq
DB search
MADYELPEDLHTSAPEGEHAALAPDTPKAPAEQGELPEKLRVHTLARVLGTSTRRVLDAL
SKLDGRARSPHSNVDKQDAAKVREALAGEAEPAAAAQAVDPAPVETETPTQAADPAPAES
PAEDPDNPPTAPILVAEPTIIEAAAVPTQATAGPTAYDYGPLFVAPQAPEPQEDRPAPAV
AASAEDVDEDSGDGDDPEAEGDGDRPANRRRRRGRRGRGRGRGEQAGGDGSDESSEDSAA
EGGETADDEDAAENADGDAAAADGDESNAEDGDTPEGASRRRRRRRRRKAGSGDEGDSAS
EDDPPNTVVHERKPRAERGDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILTEAEFLAR
REAVDRVMVVRDKTRTESPHEGARYTQIAVLEDGVLVEHFVTSAASASLVGNIYLGVVQN
VLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGSNRKIEQALKSGDYVLVQVSKDPVGH
KGARLTTQISLAGRYLVYVPGASSTGISRKLPDTERQRLKEILRDIVPSDAGVIIRTASE
GVREEDIRADVQRLQEQWQGIEQRSTELSAKASGAAMALYEEPDVLVKVVRDLFNEDFSK
LIIEGDAAWGTIDEYVKTVAPELLSRINRYEPADGPDVFAVHRIDEQLAKALDRKVWLPS
GGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEETVRQLRLRDVGGIVVID
FIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSSTCAH
CAGRGIVLHVDPVDNAGTAATGAKKPETGRRAKRSRKGKADEPEVVVARTPPHPQGEHPM
FKAMAAANGHHEDDEDGFLAEDVPDNDVIDEVDEMVEVVQSAQTSGTPEAEPEPADGDVG
RETEPENVAEVSSDESAEPAVPEPEPAAKAPSRPRRRRSAARAAGPPVEH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtggccgactatgagctaccagaagacctacacaccagcgctccagaaggggaacacgcc
gcgctagcgccggacaccccgaaagcccctgctgagcagggagaactacccgagaagctg
agggtgcacaccctggcgcgcgttctcgggacctccacccgccgcgtgctcgatgcgctg
tccaagctggacgggcgcgcccgcagcccccattccaacgtcgacaagcaggatgccgcc
aaggtgcgcgaggcgcttgccggcgaggcggaacccgccgctgccgcgcaggccgtagat
ccggcaccggtggagactgagaccccgacgcaggccgcagacccggcaccggcggagagt
ccggccgaggatcccgacaacccaccgaccgcgccgattctcgtcgcggagccgaccatc
atcgaggccgcggcggtaccgacccaggcgaccgcaggacctaccgcgtacgactacggg
ccgctcttcgtggccccacaggctcccgagccgcaggaggatcgccccgcgcccgctgta
gcggcgagcgcagaggatgtcgatgaggactccggtgacggagacgatcccgaggccgag
ggtgacggtgaccggccggccaaccggcgcaggcggcggggacgtcgcggacgcggacgt
ggccgtggcgagcaggccggcggcgacggttccgacgaatcctccgaggactccgcagcc
gagggcggcgagaccgccgacgatgaggacgctgccgagaacgccgatggtgatgccgct
gcggcagacggcgacgaatcgaatgccgaagatggtgacacgcccgagggtgccagtcgt
cgtcggcgtcgtcggcgccgccgcaaggccggaagtggtgacgagggtgacagcgcgtcg
gaggacgatccgccgaacaccgtggtgcatgagcgcaagccccgcgccgaacgaggcgat
gagattcagggtatttccggatccacccgcctggaggccaagcgtcagcgtcgccgcgac
gggcgtgatgccggacggcgccgcccaccgatcctgaccgaagcggagttcctggcgcgg
cgtgaggccgttgatcgggtgatggtggttcgggacaagacccgtaccgagtcaccgcac
gagggcgcccggtacacgcagatcgctgtcctggaggacggtgtgctcgtcgagcacttc
gtgacttcggctgcgtccgcgtcgctggtgggcaacatctacctcggtgtcgtgcagaac
gtgctgccctcgatggaggccgccttcgtcgacatcggccgtggtcgcaacggtgtgctg
tacgccggtgaggtcaactgggatgccgccggtctgggcggctcgaaccgcaagatcgaa
caggcgctcaagtcgggcgactacgtcttggttcaggtcagcaaggacccggtggggcac
aagggcgcccgactgaccacccagatctcgctggcgggtcgttatctggtgtacgtgccc
ggtgcgtcctcgaccggaatcagccgcaagctcccggacaccgaacggcagcgtctcaag
gagatcctgcgcgatatcgtcccctcggatgccggcgtcatcattcgcaccgcgtcggaa
ggcgtgcgcgaagaggacattcgcgccgatgtccaacggctgcaagaacagtggcagggc
atcgagcagcgctcgacggaactctccgccaaagcttccggtgccgccatggcgctctac
gaggagcccgatgtactggtcaaggtggtccgcgacctgttcaatgaggacttctccaag
ctcatcatcgaaggtgatgcggcgtggggcaccatcgatgagtatgtgaaaaccgttgct
ccagaacttctttcgcgtatcaaccggtatgagcccgccgatggtccggacgtcttcgcg
gtgcaccgcatcgatgagcagctggccaaggcgctggaccgcaaggtgtggttgccctcc
ggcggcacgctcgtcatcgaccgcacagaggccatgacggttgtcgacgtcaacaccgga
aaattcacgggtgccggcggcaacctggaggagacggtcacccgcaacaacctggaagcg
gccgaggaaaccgttcggcagttgcgcctgcgcgacgtcggcgggatcgtcgtcatcgac
ttcatcgacatggtgctcgaatcgaaccgggatctggtgcttcggcgcctgaccgaggca
ctgggccgcgatcgcacccgccaccaggtgtcggaagtgacatcgctgggtctggtgcag
ctgactcgtaagaaactcggtacgggcctcatcgaggcgttctcgtcgacctgcgcgcac
tgcgcggggcgcggcatcgtgctgcacgtcgacccggtcgataacgccggcacggcggcc
accggcgccaagaagccggagaccgggcggcgcgccaagcgttcccgcaagggcaaggcg
gatgagcccgaagtggtggtcgcgcgcaccccaccccacccgcagggcgagcacccgatg
ttcaaggcgatggcggcggcgaacggccaccacgaggacgacgaagacggcttcttggcc
gaggacgtgccggataacgacgtgatcgacgaggtcgacgagatggtcgaggtcgtgcag
agcgcgcagacttcgggtaccccagaggcggagcccgagcccgccgacggtgacgtcggg
cgggaaaccgagcccgaaaacgtggccgaggtgtcctccgacgagtcagccgagcccgct
gtgcccgaacctgagcccgctgctaaggcgcctagcaggcctcggcggaggcggtccgct
gcgcgtgcggccgggcctccggtcgagcactag
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