Mycolicibacterium vaccae: MYVA_3777
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Entry
MYVA_3777 CDS
T04356
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYVA_3777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvq03019
]
MYVA_3777
03009 Ribosome biogenesis [BR:
mvq03009
]
MYVA_3777
Enzymes [BR:
mvq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MYVA_3777
Messenger RNA biogenesis [BR:
mvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYVA_3777
Ribosome biogenesis [BR:
mvq03009
]
Prokaryotic type
rRNA processing factors
MYVA_3777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ANI40896
LinkDB
All DBs
Position
complement(3932739..3935693)
Genome browser
AA seq
984 aa
AA seq
DB search
MRVHSLARVLGTTSRRIIDALIELDGRARSAHSTIGREEADRVREVLAAPEPDAPEASQP
EIPEAPQVEPEVPQVAEPEAAEVAQVEAPETPEAVTPEPETAPPVEEEPESRLILEIPAA
PAGEPADYLPLFVAPKPVRFDDHFDDGDDESEDSDDDSDDDSGADSDGDDEQAGRPAAKR
RRRGRRGRGRGRGEQNGDEPADADTDGDADTDKSETDEDSDDDSSDDDGSGGDGTTRRRR
RRRRRKSGSDDDGDSSGSPDDPPNTVVHEREPRKSNRGGDKPSSDNEIQGISGSTRLEAK
RQRRRDGRDAGRRRPPILSEAEFLARREAVERMMVVRDKVRTEPPHEGARYTQIAVLEDG
VVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG
AQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDT
ERQRLKEILREVVPSDAGVIIRTASEGVKEEDIRSDVERLQQRWTEIEAKAAEITKKKAG
AAVALYEEPDVLVKVIRDLFNEDFTGLTVSGEDAWKTITDYVNAVAPELLPRMTKYEPAS
SDGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQT
VTRNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSE
VTSLGLVQLTRKKLGTGLIEAFSTTCSHCAGRGIVLHGDPVDSSSGSAGNRKTEPSGGGR
RSKRGKRGARPEQEVQVPKVPAHSPGEHPMFKAMAAANGKDEDEDDDTGVAPEEVAEIDA
DAAVTATGRGTDDELDDDFDDEESDDEESDDEESDDEDSDDEDSDDEDEIDLVDDDDDDD
DDDEIDPLDPLDEDDDDSDDDSDEDSDDDDSDDDDDSDDEDDDEEDSDEDEDEDEDPEPV
VAARPAGRHRRRAAARPAGPPSND
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
ttgagggtccattcgctggcccgggtgctcggcaccaccagcaggcggatcatcgacgcg
ctgatcgagctcgacggccgcgcccgcagcgcgcactcgacgatcggtcgcgaggaggcc
gaccgggtgcgcgaggtgctcgccgcccccgaaccggacgctcccgaggcctcgcagcct
gagattcccgaggccccgcaggtcgaacccgaggttccccaggtcgccgaacccgaggct
gccgaggttgcccaggtcgaggctcccgagacccccgaggcggtaacgcccgagcccgag
actgcaccgcccgtcgaagaagagcccgagtcccggctgatcctggagatcccggccgcc
ccggccggcgaaccggccgattatctgccgctgttcgtcgcgcccaagccggtgcgcttc
gacgaccacttcgacgacggtgacgacgagtccgaggactccgacgacgactctgacgac
gactccggtgcggattccgacggcgacgacgagcaggccggccggcctgccgccaaacgc
cgcaggcgtggtcggcgtggacgtggacgcggtcgcggcgagcagaacggcgacgaaccg
gcggacgccgacaccgacggtgacgccgacaccgacaagtccgagaccgacgaggactcc
gacgacgacagcagcgacgacgacggttccgggggtgacggcaccacccgcaggcgtcgc
cgtcgccgccgccgcaagtccggctccgacgatgacggcgacagcagcggatcgcccgac
gatccgccgaacaccgtcgtccacgaacgtgaaccgcggaagtcgaaccggggcggcgac
aagccgtcgtcggacaacgagatccaggggatcagcggctcgacccggctggaagccaaa
cggcagcggcgcagggacggccgtgacgccggccggcgtcggcccccgatcctgagcgag
gccgagttcctggcccgccgggaagcggtggagcggatgatggtggtccgcgacaaggtc
cgcaccgaaccgccgcacgagggtgcgcgctacacgcagatcgcggtgctcgaagacggt
gtcgtcgtcgaacacttcgtcacctcggcggcctcggcgtcgctggtcggcaacatctac
ctcggcatcgtgcagaacgtgctgccgtcgatggaggcggcgttcgtcgacatcggccgt
ggccgcaacggtgtgctctacgccggtgaggtcaactgggaggccgcgggcctcggcggt
gcgcagcgcaagatcgagcaggccctcaaaccaggcgactatgtcgtggtccaggtcagc
aaagacccggtcgggcacaagggcgcccggctgaccacccaggtgtcgctggcgggccgc
tacctcgtctacgtgccgggcgcctcgtcgaccggcatcagccgcaagcttcccgacacc
gagcgccagcgcctcaaggagatcctgcgcgaggtcgtcccgtccgacgccggggtgatc
atccggacggcctccgaaggcgtcaaggaagaggacatccgctccgacgtggagcgcctg
cagcagcgctggaccgagatcgaagccaaggccgcggagatcaccaagaagaaagccggc
gccgcggtcgcgctctacgaagagcccgacgtgctggtcaaggtgatccgcgacctgttc
aacgaggacttcaccggtctgaccgtctccggcgaggacgcctggaagacgatcaccgac
tacgtgaacgccgtcgcccccgagctgctcccgcggatgacgaagtacgagcccgcctca
tccgacgggccggatgtgttcgccgtgcaccgcatcgacgagcagctcgcgaaggcgatg
gaccgcaaggtgtggctgccctcgggcggcaccctggtgatcgaccgcaccgaggccatg
acggtcgtcgacgtcaacaccgggaagttcaccggttccggcggcaacctcgaacagacc
gtcacgcgcaacaacctcgaggctgccgaggagatcgtccggcagctgcggttgcgcgac
atcggcggcatcatcgtcatcgacttcatcgacatggtgctcgagtccaaccgcgacctg
gtgctgcgccgcctcaccgaggcgctggcccgcgaccgcacgcgtcaccaggtttcagag
gtcacctcgctgggcctggtgcagctgacccgcaagaagctcggcaccggcctgatcgag
gcgttctcgacgacgtgcagccactgcgcagggcgcggcatcgtgctgcacggtgacccg
gtggactcctcgtcgggctccgccggcaaccgtaagaccgaaccctccgggggcggacgc
cgcagcaagcggggcaagcgcggcgcgcggcccgagcaggaagtccaggtgcccaaggtg
ccggcgcattcgcccggtgaacatccgatgttcaaggcgatggccgcggccaacggcaag
gacgaggacgaggacgacgacaccggcgtggcgccggaggaggtcgccgagatcgacgcc
gacgccgccgtaacggcgaccggccgcggcaccgacgacgagctcgacgacgacttcgac
gacgaagaatcagacgacgaagaatcggacgacgaagaatcggacgacgaggactcggac
gacgaggactcggacgacgaggacgagatcgacctcgtcgacgacgatgacgacgatgat
gacgacgacgaaatcgacccgctcgacccgctcgacgaggacgacgacgattccgacgac
gactcagacgaggactccgacgacgacgattcggacgacgacgatgattcggacgatgag
gacgacgacgaggaggactctgacgaggacgaggacgaggacgaggacccggaaccggtc
gtcgcagctcgtccggcgggcaggcatcggcgtcgcgccgcggcccgacccgctggtccg
cccagtaacgactga
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