Nocardioides sp. JS614: Noca_3997
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Entry
Noca_3997 CDS
T00443
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca00600
Sphingolipid metabolism
nca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Noca_3997
Enzymes [BR:
nca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
Noca_3997
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
ABL83494
UniProt:
A1SNV9
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Position
4218066..4219616
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AA seq
516 aa
AA seq
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MSDAATDRDEAMGPDQALGRDDALARLRAMQAADLPVHGGRTLAYVYDSGLPDVDRIGRA
AVAAYAGSNGLDPTAFPSLLQMENELVGFAADLLDAPGTCVGTVTSGGTESVLLAVQGAR
DSRPDLARPRMVLPATAHAAFHKAAHYFGVEAVLVPVGPDFRADPAAMAAAIDEDPDRTV
LVVASAPSYAHGVVDPVTEVAAAAAARGIRCHVDACIGGWVLPYATRLGRSVPAWTFAVE
GVTSISVDLHKYGYAPKGTSVLLHRTAGLRRPQYFASAAWPGYTMLNSTLQSTKSGGPLA
GAWAVVQSLGDTGYELLSRETFEAVDAIVAGLADIPALVLAAVPDSTLVAIATDDSCDAF
TVCDEMATRGWYVQPQLSYAGHPPTIHLSVSAATNAHVDDFLAALAASVAAAQAAGPVSV
DPGIAEFIGALDPATLSDADFDGLLAAAGLVGGDAAAGLDLPERMAEVNAMLDLASPAMR
EALLVAFLDRLARPRRQGQGQRVAVDPAKASTESSE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcagcgacggaccgcgacgaggccatggggcctgaccaggccctgggccgt
gacgacgccctggcccggctccgggcgatgcaggccgccgacctgccggtacacggcggc
cgcaccctggcctacgtctacgactcgggcctgcccgacgtcgaccggatcggccgcgcg
gcggtcgccgcgtacgccggctccaacggcctggacccgaccgcgttcccgagcctgctg
cagatggagaacgagctcgtcggcttcgccgccgacctgctcgacgccccgggcacgtgc
gtgggcaccgtgacctcgggcggcaccgagtcggtgctgctcgccgtgcagggcgcgcgc
gacagccgccccgacctcgcgcggccgcggatggtgctgcccgccaccgcgcacgcggcc
ttccacaaggccgcgcactacttcggcgtggaggccgtgctggtgccggtcggaccggac
ttccgcgccgacccggccgcgatggccgccgcgatcgacgaggaccccgaccgcaccgtg
ctcgtggtggcgtcggcgccgtcgtacgcccacggcgtcgtcgacccggtcacggaggtg
gcggcagcggccgcggcccgtggcatccggtgccacgtggacgcgtgcatcggcggctgg
gtgctgccctacgcgacgcgcctgggccggtcggtgccggcgtggacgttcgcggtcgag
ggcgtcacctcgatctcggtggacctgcacaagtacggctacgccccgaagggcacgtcc
gtgctgctgcaccgcacggccgggctgcggcgtccgcagtacttcgcctccgcggcgtgg
ccgggctacacgatgctgaactccaccctgcagtcgaccaagtcgggcggacccctggcc
ggcgcctgggcggtcgtgcagtcgctgggtgacacggggtacgagctcctctcccgagag
accttcgaagccgtcgacgcgatcgtggcagggctcgccgacatcccggcgctcgtcctc
gcggccgtccccgactcgacgctggtcgcgatcgcgaccgacgacagctgcgacgcgttc
acggtgtgcgacgagatggcgacccgcgggtggtacgtccagccgcagctgtcgtatgcc
gggcacccgccgaccatccacctctcggtgagcgcagcgaccaacgcccacgtcgacgac
ttcctcgcggcactggccgcctcggtggcagccgcgcaggcggccgggccggtgtcggtg
gaccccgggatcgcggagttcatcggcgccctcgacccggcgacgctctcggacgcggac
ttcgacggcctgctcgccgccgcaggcctggtgggcggcgacgccgcggcgggcctcgac
ctccccgagcggatggccgaggtcaacgcgatgctcgacctcgcgtcccccgcgatgcgc
gaggcgctgctcgtcgcgttcctggaccggctggcccggccccggcggcagggccagggt
cagcgggtggcggtcgacccggcgaaggccagcaccgagtccagcgagtag
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