Sciurus carolinensis (gray squirrel): 124986789
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Entry
124986789 CDS
T08117
Name
(RefSeq) zinc finger SWIM domain-containing protein 6 isoform X1
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124986789
Cilium and associated proteins [BR:
ncar03037
]
Other cilia and associated proteins
Stereociliary proteins
124986789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
124986789
NCBI-ProteinID:
XP_047411485
EnsemblRapid:
ENSSCRG00010011919
LinkDB
All DBs
Position
6:49783027..49963834
Genome browser
AA seq
1210 aa
AA seq
DB search
MAERGQQPPPAKRLCCRPGGGGGGGGGGGGSSGGGGAGSGYSSACRPGPRAGGAAAAACG
GGAALLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSERE
ICMYSSFNTGGGAAGGPGDDSGGPGGAGGGAGGGGSSSSPAATSAAAAAAAAAAAAAAAA
GAGAPSVGAAGAADGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQSEPET
VCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNR
DQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLD
EEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMADPRLS
LWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPWEDGN
HGSELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSDLYTNYC
YHDDTENSLFDSRGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQQKQL
EMFRTQKKELPHKSITSITNLEGWVGHPLDPVGTLFSSLMEACHTDDENFSGFSDFTENG
HCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEEQLICK
LQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPHDAELA
YKIALRAMRLLVLESTAPTGDLTRPHHIASVVPNRYPRWFTLSHIESQQCELASTMLTAA
KGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRM
TLSTLNWRRREMVRWLVTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNSTIVR
LHLDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGM
SYTQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKN
ELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDAT
IGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKKK
LMMLVRERFG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggacagcagcctcctcccgcgaaacggctctgctgccggccgggcggc
ggcggcggcggcggcggcggcggcgggggcagcagcggcggcggcggcgcgggtagcggc
tacagttctgcttgtcggccgggcccgcgggcgggcggagcggcggcggcggcgtgcggg
ggcggcgcggcgctgctgccgccgggcaagacccagagccccgagtcgctgctggacatc
gcggcgcgcagggtggcggagaagtggccgttccagcgcgtggaagagcgcttcgagcgc
atcccggagccggtgcaacgccgcatagtctactggtccttcccccgcagcgagcgggag
atctgcatgtactcgtccttcaacaccggtggcggcgccgcgggcggccccggcgacgac
agcggcggccccggcggcgcgggcggcggcgccggcggcggcggctcctcgtcttcgccg
gccgccacctcggccgctgccgccgctgccgccgccgccgccgccgccgccgccgccgcg
ggggccggggccccgtcggtgggggccgccggggcggcggacggcggcgacgaaacgcgg
ctgcccttccgccggggtatcgctttgctggagagcggctgcgtagacaacgtcctgcaa
gtcggtttccacttgagtggcacagtgacagaacctgcaatacaatcggagccagaaact
gtttgcaacgtggccatcagctttgatcgttgcaagattacctcagtgacctgcagctgt
ggaaacaaggacatattttattgtgcccatgttgtggcactgtctttataccgcatccgc
aagccagatcaggtcaaactgcatcttcccatttcagagactctctttcaaatgaataga
gaccaactacaaaagtttgtacagtatttgatcacagtgcaccacacggaagttttgcca
actgctcaaaaactagcagatgaaattctttcccaaaattcagaaatcaaccaagttcat
ggtgctcctgatccaactgcaggtgctagtatagatgatgaaaactgctggcacttagat
gaagagcaggttcaagaacaggttaaactgttcctttcccagggcgggtaccacggatca
gggaagcagcttaatttgctctttgcaaaggtgcgggagatgttgaagatgagggactcc
aatggggcccgcatgttgaccttgattacagagcagttcatggctgaccctcgcctgtca
ctttggaggcagcaaggcactgcaatgactgacaaatataggcagctctgggatgaactg
ggtgctctgtggatgtgtatagttttaaacccacactgcaagttggagcagaaggcgagt
tggctaaaacaactgaaaaagtggaacagtgttgatgtctgtccatgggaagatggaaat
catggcagtgaattacccaacttaactaatgctctgcctcagggtgcaaatgccaaccaa
gattcatcgaacaggccacatcggacagtgttcacacgagccatcgaggcatgcgatctc
cactggcaggatagccatttgcagcatattatcagcagtgacctatacaccaactactgt
taccatgacgacactgaaaactccctctttgactcccgcgggtggcccctctggcatgaa
catgttcctacagcctgtgcaagagtggatgcattacgttctcatgggtaccccagagaa
gcactgagactagcaatagctattgttaacacattaagacgacagcaacagaaacagttg
gaaatgttccggactcaaaaaaaagagctaccccataaaagcataacctcaataaccaat
ctggaaggctgggtcggacatcccctagaccctgtgggcactctcttcagtagccttatg
gaagcctgccacactgatgatgaaaacttctctgggttctcagattttacagaaaatgga
cactgcaagtctctggaataccaacatctacctgcacacaaatttttagaagaaggggaa
tcctatttaaccctggctgtggaagtagccctgataggactgggacagcagcgtatcatg
cctgatgggctgtacactcaagagaaagtttgccgaaatgaggagcagctcatttgtaag
cttcaggaaattgaattggatgatacactggtgaaaatttttcgcaagcaagcagtcttc
ctattagaagctgggccatatagtggtttaggcgaaataatccaccgggagagtgttcca
atgcacacatttgccaagtatctcttcacctctctcctacctcatgatgctgaactggca
tacaaaattgcactgagagcaatgcggttgctagtattggaatctactgctccaacagga
gacctcacccgcccacaccacattgcatcagttgttcccaaccgataccctcgttggttc
actctaagccacattgaatcccagcagtgtgagctggcatccaccatgctaactgcagcc
aaaggtgatgttcggaggctagaaacagtattagaatccatccagaaaaacattcactcc
tcatcacacatcttcaaactcgcccaagatgcatttaaaatagcaactctcatggacagt
ttgccagacatcactcttttgaaagtgtctctggagctgggcctgcaggttatgagaatg
acactgtcaaccttaaattggcggcggcgggaaatggtgagatggctggtgacatgtgct
actgaagttggtgtttatgccctggacagcatcatgcaaagctggtttactctttttact
cccactgaggccacaagtattgttgcaactaccgtgatgtccaacagtaccatcgtccgt
ctccatctggactgccaccagcaggaaaagctggccagtagcgcccggacgctcgccttg
caatgcgccatgaaggacccacagaactgtgccctctctgcgctaaccctttgtgaaaag
gatcacatagcttttgagacggcgtaccaaatcgtcctggacgctgctaccactggcatg
agctatacacagctctttacaatagcacggtacatggagcaccgcgggtaccccatgagg
gcctacaaactggccaccctggccatgacccatctcaacctgagctataatcaggacacg
caccctgccattaatgacgttttatgggcctgtgcgctcagccactccctcggcaaaaat
gagcttgcagctataatacctctggtggtgaagagtgtcaagtgcgcaacggtactgtca
gacattttgcgcaggtgcactctgaccactcctggcatggtgggacttcatggaaggagg
aactctggtaagctcatgtcactggacaaagcccccttgaggcaactcctggatgccacg
attggggcctacatcaacacaacacactcacgactcacacacatcagtcctcggcactat
agtgagtttatagagttcctcagcaaggcccgagagaccttcctaatggcgcatgatgga
cacattcagtttacacagtttattgacaacctgaaacaaatctacaaaggcaaaaagaaa
ctgatgatgttggttcgggagaggtttggttga
DBGET
integrated database retrieval system
