Nocardia terpenica: CRH09_28325
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Entry
CRH09_28325 CDS
T05168
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ntp
Nocardia terpenica
Brite
KEGG Orthology (KO) [BR:
ntp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntp03032
]
CRH09_28325
03036 Chromosome and associated proteins [BR:
ntp03036
]
CRH09_28325
03400 DNA repair and recombination proteins [BR:
ntp03400
]
CRH09_28325
DNA replication proteins [BR:
ntp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CRH09_28325
Chromosome and associated proteins [BR:
ntp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CRH09_28325
DNA repair and recombination proteins [BR:
ntp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CRH09_28325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ATL69505
UniProt:
A0A164J9S4
LinkDB
All DBs
Position
complement(6404160..6404792)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEQIVDTIVRAVNKGQSVTITGFGVFEQRKRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAIIAGKQKIAAAGPAVKRGVAAPVSGGTAKKTAR
KAAKKTTAKKAAAKKTVAKKAPAKKTAAKKAPAKKTVAKKATVKKTAAKKATAKKTAAKK
TTARTTAKKTTAKKTAAKRTAAKRPAARRR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgacgttctgaccgaaaagttgggtactgacaggcgcacg
gccactgcggcagtcgagcagattgtcgacacgatcgtgcgtgctgtgaacaagggacag
agcgtcaccatcaccggattcggtgtcttcgaacagcgcaagcgtgcggcacgggtggcg
cgtaacccccgtaccggcgaaaccgtcaaggtgaagccgacttcggtccccgccttccgt
ccgggcgcgcagttcaaggcgatcattgcgggtaagcagaagatcgccgctgcgggtccg
gccgtgaaacgcggtgtggcagcgccggtgtcgggtggcaccgcgaagaagacggccagg
aaggcggccaagaagacgaccgccaagaaggccgcggccaagaaaacggtcgcgaagaag
gctccggccaagaagacggccgccaagaaggctccggccaagaagacggtcgcgaagaag
gccacggtcaagaagacggccgccaagaaggcgaccgccaagaagaccgcggccaagaag
accacggccaggaccaccgcgaagaagacgaccgcgaagaagaccgccgccaagcgcact
gccgccaagcggcccgccgcccgtcgtcgctga
DBGET
integrated database retrieval system
