Neisseria weixii: CGZ65_01375
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Entry
CGZ65_01375 CDS
T07968
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nwx
Neisseria weixii
Pathway
nwx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGZ65_01375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwx03019
]
CGZ65_01375
03009 Ribosome biogenesis [BR:
nwx03009
]
CGZ65_01375
Enzymes [BR:
nwx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CGZ65_01375
Messenger RNA biogenesis [BR:
nwx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGZ65_01375
Ribosome biogenesis [BR:
nwx03009
]
Prokaryotic type
rRNA processing factors
CGZ65_01375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Reprolysin_5
PgpA
Zn_Tnp_IS1
Motif
Other DBs
NCBI-ProteinID:
ATD64310
LinkDB
All DBs
Position
248175..251117
Genome browser
AA seq
980 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGVITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERAELKAAMAELDVPRGMSLIARTAGIGRSVEELQW
DFDYLLKLWRAIEEAGEAHKDPYLLFMESSLLIRAIRDYYRPDIGEILVDNQEVHDQVSE
FMSYVMPNNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV
LRIIQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFGMEERLDVSVLLIPNIHLENPHY
EISRIRTDDVEEDGEPSYKRVAEPAEDENAKPFGSERAKAARPEPAVKGVQHTQPAPTVA
EQKPATWWDNFKAWLGKIFGGATASAEPEKPVEEKAEKRQANGNRNGNNNRRQQNRRQNP
RRNKRDGSKVEVHEVSAEAKETKAVDSKADNKTEAKAEGKENNRNRCERNRSNKEERNQA
AASVAALTDMPSETGGQAAPAANKRSRNNRNANKNVAVETAEENVVVENVAAETVAEVAV
ESAPAAEKQPRERNSRNQRDRNNNRNQRDRRSSNKKRNIPSAEKIEHYLNIADAADKVRF
AVAHVFGETVEQTPVAVAVPGEPVAEVEENAPLVVVIPEPVEAETVTFAIETEAHEAEAI
RVEESTDDERVIIDNAVGNVAAAVTSVFAIEAADEFLPMTAVPADQEAQAVAVMEDELIA
ARASKEVEAAVQEVVEKEQAVADAMPSLGELVFVETNPEAVAALAQAQPEKVYGLRRADV
PKVEAENVEVEMILVETRKD
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttatttaatgcaacgcaagccgaagagctgcgcgttgcgattgtcgat
ggccaaaatttattggatttggacatcgaaacgctgggcaaagaacagcgcaagggcaac
atctacaaaggtgtgattacccgcatcgagccgtcgttggaagcgtgtttcgtcgattac
ggaaccgaccgacacggctttttgccgtttaaagaagtgtcgcgttcgtatttccaagat
tacgaaggcggccgcgcccgcattcaagacgtgctcaaagagggcatggaagtcattgtg
caggtggaaaaagacgagcgcggcaacaaaggcgcagccctgaccacgttcatcagcctg
gccggacgctatttggtgttgatgccgaataatccgcgcggcggcggcgtatcgcgccgt
atcgaaggcgaagagcgcgccgaactgaaagccgcgatggccgaattggacgtgccgcgc
ggcatgagcctgatcgcgcgcaccgccggtatcggccgcagcgtggaagaactgcagtgg
gatttcgattatctgctgaaactgtggcgcgccatcgaagaagcgggcgaagcgcataaa
gatccgtatttgctgtttatggaaagctcgctgctgatccgcgccatccgcgattactat
cgtccggatatcggcgagattttggtcgacaatcaagaagtgcacgaccaagtgtctgaa
ttcatgagctatgtgatgccgaacaacataggccgcctgaagctttacgaagaccatacg
cctctgttctcacgcttccaaatcgaacatcaaatcgaaagcgcgttctcacgcagcgtc
agcctgcccagcggcggtgcgattgtgatcgaccacaccgaagcgctggtatcgattgac
gtcaactccgcccgtgccacacgcggcgccgacatcgaagacacggcgttcaaaaccaat
atggaagcggccgaagaagtggcacgccaaatgcgtttgcgcgacttgggcggcttggtg
gtcatcgacttcatcgacatggaaaacccgaaacaccaacgcgatgtcgaaaacgtgttg
cgtgacgcgctgaagaaagaccgcgcgcgcgtgcaaatgggcaagctctcccgcttcggc
ctgcttgagttgagccggcagcgtttgaaaccggccttgggtgaaagcagccatgtggcc
tgcccgcgttgtgccgggaccggtgtgatccgcggcatcgaatcgaccgcgctgcacgtg
ttgcgcatcattcaagaagaagccatgaaagacaacaccggcgaagtgcatgcgcaagtg
ccggtggatgtggcgaccttcctgctgaacgaaaaacgcgccgaactgtttggtatggag
gagcgtttggacgtatccgtattgctgattccgaacattcacctggaaaatccgcattac
gaaatcagccgcatccgcaccgatgatgtggaagaagacggcgagccgagctacaaacgc
gtggccgagcctgctgaagacgaaaacgccaaaccgttcggcagcgagcgcgccaaagcc
gcccgccctgaacctgcggtaaaaggcgtgcagcacacccaaccggcgccgaccgtggcc
gagcaaaaaccggccacttggtgggacaacttcaaggcctggctgggcaaaatcttcggt
ggcgcgacggcctctgccgagcctgaaaaaccggtggaagagaaagccgaaaaacgccaa
gccaacggcaaccgtaacggcaacaacaaccgccgccagcaaaaccgccgccaaaacccg
cgccgcaacaaacgcgacggcagcaaggtagaagtgcacgaagtcagcgccgaagccaaa
gaaacgaaagccgttgacagcaaagccgacaacaagaccgaagccaaagcggaaggcaag
gaaaacaaccgcaaccgctgcgagcgcaaccgttcaaataaagaagaacgcaaccaagcc
gccgcctcggttgctgctctgaccgatatgccgtctgaaaccggcgggcaagccgcacct
gctgccaacaagcgcagccgcaacaaccgcaatgccaacaaaaacgttgccgttgaaact
gctgaagaaaatgtagtggtcgaaaatgttgccgcggaaaccgtggcagaggtggctgtt
gaaagcgcaccggcggctgaaaagcagccgcgcgagcgcaacagccgcaaccaacgcgac
cgcaacaacaaccgtaatcagcgtgaccgccgcagcagcaacaaaaaacgcaatattccg
tctgccgagaaaatcgagcattatctgaatatcgccgatgcagcggataaagtacgcttt
gccgtggcgcatgtgtttggcgaaaccgtggagcaaacgccggtggcggttgccgtaccg
ggcgagccggtggccgaagtggaggagaacgcaccattggtggttgtgattccggagccg
gttgaagccgaaaccgtaactttcgccattgaaaccgaagcgcatgaagcggaagccatc
cgtgtggaagaaagcaccgatgacgaacgtgtcatcattgataacgctgtcggcaacgta
gccgctgctgtgacttccgtatttgccattgaggcggcggatgaatttttgccgatgacc
gccgtgccggccgatcaagaagcccaagccgtagcggtcatggaagacgagctgattgcg
gccagagcctctaaagaagttgaagcagcggtgcaagaagtggtggagaaagagcaggcc
gttgccgatgcgatgccgtcattgggcgaattggtgtttgtcgaaaccaaccctgaggcc
gttgccgctttggctcaagcgcaaccggaaaaggtatacggtttacgccgtgccgatgtg
ccgaaagtggaagctgaaaacgttgaagttgagatgattttggtggaaacccgcaaagat
tga
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