Ostrea edulis (European flat oyster): 125652317
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Entry
125652317 CDS
T09123
Name
(RefSeq) ribosome biogenesis protein SPATA5L1-like
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125652317
Enzymes [BR:
oed01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
125652317
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125652317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_14
RuvB_N
TIP49
DUF815
AAA_22
AAA_7
AAA_33
NTPase_1
NACHT
RNA_helicase
nSTAND3
AAA_11
bpMoxR
AAA_19
Rad17
TsaE
AAA_24
AAA_18
DUF4055
Motif
Other DBs
NCBI-GeneID:
125652317
NCBI-ProteinID:
XP_048737365
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All DBs
Position
5:46016394..46027927
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AA seq
754 aa
AA seq
DB search
MSASIAMDHMYQVRKITDITTQKCRIDISTLRQLEVKPASYAVISMESTEYICQVWPTQH
LGTGIEVGTAVKKHTDVKKEKTCKIKPLNVVPGKSVSVSLVVTKAEDVRAYRRMTTESAQ
NVADICRGLLYKTCISSHFVVDKENCTLAKLHGISLILIDKVSDDNYCVVDNTTYITVKA
IQSREHYLQKQATVETIPLGGLDKVSKELCEFIRLSFSEKSTANSILRLPKGVLLRGPPG
TGKTSLVRNVCMKCNAFIISVNGPEVFGSRSGETEENIKKVFEKAFLMSEEGPCVVFLDE
IDSLCPKRGNSDDTNDTRSTSVFLSYLDKIHDYKNIAVIGATNRPAALDPSLRRPGRLDR
EIMINVPTLSQRKEILNHQCAELRVDSGLELEVIAQMTNGYVGADLMSLCHEAAFRAMSS
LQSSFTEDKVTDPPLITTKHFKEALTKVMPSTQKGSPCTTDFDPVHWDDIGGLEEAKLQI
QQAVEWPMKYPEAFHRMGLPSPRGVLLYGPPGCCKTTLVKAVATSSNATFLSLSGAQLFS
PYVGDSEKLISEVFQRARAGAPTLIFLDEIDSIIGKRADGTAQRGVQERVLSTLLNEMDG
IGIRLDEKTDSVQTGDDGLVRDQANKSVLVVAATNRPDMLDEALTRPGRLDRSLYIPPPD
TQGRLEILKVCTKTMPVKDIDLSVVATKTENYTGADLKNLCREAALLALTENLACDVVTE
QHLNTALMVVKPSLTPSLLKKYKCCSEEKKLFVL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctccatagcaatggatcatatgtatcaagtgaggaaaattacagacattaca
acacagaaatgcaggattgacatttctaccctgagacagctggaagttaagccagcatca
tatgcagtcatatccatggaaagcacagaatatatctgtcaagtttggccaactcaacac
ttagggactggaatagaagtaggcactgcagtcaaaaaacatacagatgtaaagaaagag
aagacttgtaaaattaaaccactgaatgtcgtaccaggcaaaagtgtcagtgtgagcttg
gttgtgactaaggcagaagatgtgagagcatacagacgaatgactactgagagtgcacaa
aacgtagcggatatctgtaggggactactgtataaaacctgtatatcttcccactttgtt
gtggacaaggagaattgtactctggccaaattacatggtatttcccttattctgatagat
aaagtatctgatgataattactgtgttgtggacaacaccacatatataaccgtgaaagca
atacaaagcagagaacattatttgcaaaaacaggctactgtagagaccattcctttagga
ggcttagataaggttagtaaagagttatgtgaattcatacgtttatcctttagtgaaaaa
tcaactgcaaacagtattttgaggctccccaaaggagttcttctgcgtggcccaccaggg
acaggaaaaacgtcacttgtcagaaatgtgtgtatgaaatgcaatgcttttataatctct
gtaaatggaccagaagtatttggatcacgttcaggagaaactgaggagaacataaagaag
gtttttgaaaaagcttttcttatgagtgaagagggaccctgtgttgtttttctggatgaa
attgattcattgtgtccgaaaagggggaactctgatgacaccaatgatacacgctcgaca
agtgtgttcctctcttatctagacaaaatacatgactataagaatatagctgtaataggg
gccaccaacagacctgctgctctggaccccagtctgagacgacctggacgactagacaga
gagatcatgataaatgttcctactcttagccaaaggaaagaaatattgaaccatcagtgt
gctgaattaagagttgattctggtctggagttggaagtgatagcccagatgaccaatgga
tatgtaggtgcagacttaatgtcactgtgccatgaagcagcatttagagccatgagttct
ctccaatccagttttacagaagacaaggtgactgatcctccattaataacaacaaagcac
tttaaagaagccctcacaaaagtgatgccatccacacagaaagggtcgccatgcaccact
gactttgatcctgtacactgggatgatattggtggtttggaggaggccaaacttcaaatc
cagcaggcagtggaatggcccatgaagtacccagaggcatttcatcgtatgggtctgcca
agtccacgcggtgtattgttgtatggtccacctggctgctgtaagactactctggtcaaa
gcagtagccacctcatctaatgctacctttctgtccctcagtggagcccagttattctca
ccatatgttggggactctgagaaacttatctcagaggtcttccagagagctcgggcaggt
gcccctaccctcattttcttagatgagatagactcaatcattggcaagcgcgctgatggg
acggcacagagaggggttcaagagagggtactctccacactactgaatgagatggatggt
attggaatcagattggatgagaagacagattctgttcaaacaggagatgatgggctagtt
agagatcaagccaataaaagtgtgctagtagtggctgccacaaatcggccagacatgttg
gatgaggctctgacgaggcctgggagattggacagatcactttatataccccctccagat
acacagggtagactggaaattcttaaagtctgcacaaagaccatgccagtaaaggacatt
gatttatctgtcgtggcaaccaagactgaaaactacactggagctgatcttaaaaatctc
tgcagagaggctgcgttgttagcattgacagagaatttagcatgtgatgtagtcactgaa
cagcatcttaacacagccctgatggtggtgaaaccttcactcactccatctttactgaag
aaatacaaatgctgttcagaggagaaaaaactttttgttctttga
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