Oncorhynchus kisutch (coho salmon): 109875680
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Entry
109875680 CDS
T09179
Name
(RefSeq) retinoic acid receptor alpha-A isoform X4
KO
K08527
retinoic acid receptor alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109875680
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109875680
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109875680
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
109875680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109875680
NCBI-ProteinID:
XP_020323686
Ensembl:
ENSOKIG00005047197
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All DBs
Position
LG25:complement(5016869..5290328)
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AA seq
456 aa
AA seq
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MYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHHYSTSIRNQHWNGSNHSI
ETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKSMV
YTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQESTESYVLS
IETEQMINRVSKAHKETFPSLCQLGKYTTSNSSERRVALDVDLWDKFSELSTKCIIKTVE
FAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAG
FGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALKI
YVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLE
NGATGTRTSGAPPGSCSPSLSPSSAQSSPSPTTQSP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagagtgtggacgtcgtgggactgaatcccagcccgaacccgtttttaatgatg
gattactacaaccagagcagaggatgtttgatcccagagaaaggacttgtgcccggagcg
cctcatcactacagcacgtccatcagaaatcaacactggaacggctcgaatcactcgata
gagacacagagtaccagctcagaggagatagtgccaagcccgccatcgccgcctcctccc
ccgagggtctacaagccctgcttcgtgtgccaggacaaatcctcaggataccactatgga
gtcagtgcctgcgaaggttgcaagggcttctttcggaggagcatccagaagagcatggtg
tacacatgtcaccgggagaagaactgcatcatcaacaaggtcaccaggaaccgctgccag
tactgccgcctgcagaaatgcttggaagtgggcatgtccaaggagtcggtgaggaacgac
cggaacaagaagaagaaggatgagaagaagcaggagagcacagagagctacgtgctgagc
attgagacggagcagatgatcaacagggtcagcaaggcgcataaggagaccttcccttcg
ctctgccagctgggcaaatacactacgagtaacagctcagagaggcgtgtggctctggac
gtggacctgtgggacaagttcagtgagctgtccaccaagtgtatcatcaagacggtggag
ttcgccaagcagcttcctggcttcaccacgctcaccatcgctgaccagatcaccctgctc
aaggccgcctgtctggacatactgattctgcggatctgcacgcgctacacaccggagcag
gacaccatgacgttctctgatggcctgacgctaaaccgcacccagatgcacaatgccggc
ttcggaccgctcaccgacctggtgttcgccttcgccaaccagctcctccccctggagatg
gatgatgctgagacggggctgctcagcgccatctgtctgctgtgtggagatcggcaggac
ctggagcaggcagacaaggtggacgtactacaggagcccctactggaggctctgaagatc
tacgtgaggaagaggaggcctcacaaaccacacatgttcccaaagatgctgatgaaaatc
accgacctgaggagcattagcgccaaaggagctgagcgtgtcatcaccctgaagatggag
atcccgggctccatgccccctctcatccaggagatgctggagaactctgagggtctggag
aacggggccacgggcacccggaccagcggagcccccccaggcagctgcagccccagcctg
tcccccagctccgcccaaagcagccccagccccaccacacagtcgccgtag
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