Oncorhynchus kisutch (coho salmon): 109889773
Help
Entry
109889773 CDS
T09179
Name
(RefSeq) sphingosine-1-phosphate lyase 1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00600
Sphingolipid metabolism
oki01100
Metabolic pathways
Module
oki_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109889773
Enzymes [BR:
oki01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
109889773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
109889773
NCBI-ProteinID:
XP_020337066
Ensembl:
ENSOKIG00005004045
LinkDB
All DBs
Position
LG4:complement(60137851..60172270)
Genome browser
AA seq
570 aa
AA seq
DB search
MDYWSALEVYKEMLLLYLEEGKQLVNTNCEELEPWQIIGATLVSTLGAVWVKGFLFQQET
LTSRLKKQCFRLIRKIPFVGATIQNQLKKALADMSLSLCTLKEGMSYTKQLPEQGLSQVQ
VLDRIREYQTLNEVDWEKGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDLFPGVRKM
EAEIVRMACTLFNGGPTSCGTVTSGGTESILMACKAYRDMAYERGVKHPEIVAPVSVHAA
FDKAANYFGMKLVHIPLDKKTLKVDVKAMRRAINKNTAMLVCSAPQFPHGIIDPIEEVGK
LAVKYNLPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGFAPKGSSVI
LYSDKQYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMYMGEDGYIKTTKKII
DTARTIKTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTQEGVAEQFISEVKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISCG
FLDCLYSTEEPRSSQPQKTHINGNSNGKAH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggactattggagtgccttggaggtgtacaaggagatgctactgctctacctggaggaa
ggcaagcagcttgtgaacaccaactgcgaggagctggaaccctggcagatcattggagct
actctcgtatctaccctaggagcagtctgggtcaaaggcttcttgtttcagcaagaaacc
ctgacatcccgactcaagaagcagtgctttcgactcatcagaaaaataccctttgttggc
gcgacaatccagaaccagctgaaaaaggccctggctgacatgtctctcagtctttgcaca
ctgaaggagggcatgagctacactaaacagctgcctgaacaagggcttagccaagttcaa
gttttagaccggatcagagagtatcaaacactgaatgaagtggattgggagaaaggacga
gtttcaggcgcagtgtactggggagatcagacacttaccaaacttttggtgaaggtatat
ggagactttgcatggagcaacccacttcacccagacctctttcccggtgtgaggaagatg
gaggcagagattgtgagaatggcgtgtaccctcttcaacggtgggcccacctcttgtggc
acagtcacctccggaggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcggggtgtgaaacatcctgaaattgtcgcaccagtcagtgttcatgcagcc
tttgacaaagcagcaaactactttggaatgaagcttgttcacatccccctggacaagaag
accttgaaagtggatgttaaggctatgaggcgagccatcaacaagaacacagccatgctg
gtatgctccgcaccccagttcccccatggaatcattgatcctattgaggaagtaggaaag
ctggctgtaaagtacaacctccctctgcatgtggatgcttgtttgggagggtttctaata
gttttcatggccaaagccaattacccactggctccctttgacttcagggtaaagggtgtg
accagcatctctgcagacacacacaagtacggctttgcccccaaaggttcatcagtgatc
ctgtatagtgacaaacagtacaggcattaccagtactttgtggctccagactggcagggg
ggcatctatgcatccccatcagtggcaggttctcggccaggcggtatcatcgcagcgtgc
tgggccaccatgatgtacatgggagaggatggctacataaagactactaagaagatcatt
gacactgcacgaactatcaagacagaaatccgtaagataaatggagtgtttgtgtttgga
gaccctgaagtgtccgtggtggcaataggctctgacgtcttcgacattttccgtttatcc
aatgcactgacgtcaaagggttggaatctcaacacgctacagtatccatccagcatccat
atctgttgtacagtgctgcacacacaggaaggtgtggccgaacagttcatcagtgaggtc
aaagagcaggtggctctcattttgaagaaccccaatgagaagaccactggaatgggagcg
atctatggcatggcccagtccatccccgacagatccatggtgacagagatctcctgcggt
ttcctggactgcctctacagcacagaggagccaaggtcctctcagccccagaagacccat
ataaatggcaacagcaatggcaaggcccactga
DBGET
integrated database retrieval system