Oncorhynchus mykiss (rainbow trout): 110496314 Help Entry 110496314         CDS       T07259                                  Name (RefSeq) brevican core protein   KO K06792   aggrecan 1 Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:omy00535]     110496314    00536 Glycosaminoglycan binding proteins [BR:omy00536]     110496314    04091 Lectins [BR:omy04091]     110496314 Proteoglycans [BR:omy00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    110496314 Glycosaminoglycan binding proteins [BR:omy00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    110496314 Lectins [BR:omy04091]  C-Type lectins   Group 1: Proteoglycan core proteins    110496314 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF EGF_2 Motif Other DBs NCBI-GeneID:  110496314 NCBI-ProteinID:  XP_036808784 LinkDB All DBs Position 18:42711280..42747345 Genome browser AA seq 1594 aa AA seqDB search MFVEIMRPVRLLPLLCTVCHLTMAFPAQTGYSEDDKRQLQVTISKTTPISTAHLGGSITI TCLVSLSPGPPSSSSPPIPPRIKWSVLHEGEQEETEILVARGQRVKVNEAYRERASLVNF ADSPEDLSLWLGELRSSDTGHYRCEVQQGLDDASDFTQIKVKGVVFHYRHASGRYAFSFS EAQRSCEGIGAHIATPDQLLAAYYDGYEQCDAGWLADQSVRYPIQVPREGCYGDMDGRPG LRNYGTLESEELFDVYCYVEHIDGEVFHGSAPQQLSLDEARAYCEKEGAELATTGQLYVA WSKGMDSCNPGWLSDGSVRYPIIIPRERCGGPQAGVKTLYRYSNQTGFPESSSRHDVYCF RGVGNPHTDAPMDYMATEPEDIGQDIVVLMELAEELYLSQDSKQVEREAQSVLGSLPVFQ SAPAQEDLQGTPPTALSSTEVPLTHTASSQDLLQPFDETSLPVEENYHSQHATSLPNTSS EPDSLHERDYHSQNSSSIPSTSTKPDSLHEGDYHSQNSSSIPSTSTKPDSLHEGDYHSQN SSSIPSTSTKPDSLYEGDYHSQNSSSIPSTSTKPDSLHEGDYHSQNSISIPSTSSVPDSV YEGDYHSQNYISIPSTSSEPDSLHERDYHSQNSSSLPSTSSKPDSLHEGDYHSQNSTSLP STSSEPVSLHEGDNHSQNSTSLPNTSSEPDSLHEGDYHSQNSTSLPSTSSEPVSLHEGDN HSQNSTSLPNTSSEPDSLHEGDYHSQNSTSLPSTSSEPDSLHEGDYHSQNSTSLPSTSSE PDSLHEGDYHSHNSTSLPNTSSEPDSLHEGDYHSQNSTSLPRTSSVLDSLHEGNSSLYRL VLETAPEFPEPSYEPHRHYQPMPEMNPEETDYQQSGSSKHFQPMPETNLELDQVEANYST TGGNQSHRENTKETTTMAFEPIENATEARDHAAERRHKEVIVGEPEETSISTKSPGELDP RPAWSTLSPHAKATSVWSPLDGSGDVSQEIELVVHQGIHTDRFPTSSSSSSSSSSSSSFT THMSASPGATSIPSEEQTGVTHSSSILSGLDHSEELGLDVYSTVGHPKVTSQGTSSARLE GSTSLDFEGIVIPERLVPSREVELAPGESDEEHLGSGEGIATTESPDLSTTSQLSVEFTT LGYQTTTMSRIEMDPTTTDPEEDGNGHEPSTDEPSLGEKVTVFPLESQTSSWDLHRTTSA PQESQEDLEYSGEPLSTSSQTDLPDSSEEPDLFGSDSLSTSSTDPTAATMSTSTMYTSTE WATRTWSPTTSTTQGPPETSEPERVTALMPPVDQGRLDLEFGLTQPPTLLMLPNERAAVG SARKISDACLEDPCANGGTCVEMGGSTKCLCLPSYGGDLCQTDLEQCEVGWQKFHGNCYK HFNQRLSWEVAEQHCRMVGGHLASIMTPEEKDFINNNFKEYQWTGLNDKTIEGDFHWSDG NPLLYENWYRGQPDSYFLSGEDCVVMVWHDSGHWSDVPCNYHLAYTCKKGTSSCGPPPKV RNALAFGKIRQRYETGAVVRYYCAQGFQQRRNSLAVCLPGGKWEEPQILCIPGAGSTAQT VGVTSLTTGSQELAEEESQTTKETLQYWDIKWNF NT seq 4785 nt NT seq  +upstreamnt  +downstreamnt atgtttgtcgaaataatgcgaccagtaaggctcctcccccttctgtgcacagtttgccac ctgaccatggctttccccgcccaaacaggatactcagaagacgacaagcgtcaactccag gtcaccatctccaagacaacccccatctccactgcacacctggggggctccatcacaatc acctgcctggtgtccctgtcacctgggcccccctcatcctcctcgcccccgatcccaccc cggatcaagtggagcgtgttgcatgagggggagcaggaggagacagagatcctggtggcg cggggtcaaagggtgaaggtcaatgaggcctacagagaacgagcctccctggtcaacttt gcagactcgcctgaggacctctccctctggttgggggagctgcgctcaagcgacacgggg cactaccgctgcgaggtgcagcaaggcctggacgatgccagtgatttcacacagataaaa gtcaaaggtgtggtctttcactacagacacgcctctggccgatatgcgttttcgtttagt gaggcccagaggtcgtgcgagggcattggggcacacatcgccactcccgaccagcttctg gcagcctattacgatggctatgagcagtgtgacgccggctggctcgctgaccaatctgtc agatatccaatccaagttccccgggaaggttgctatggtgacatggatggccgcccggga ttgaggaactatgggacgctggaatcagaggagctgtttgatgtgtattgttatgtggag catattgatggggaggtgttccatggctctgcccctcagcagctgtcattggacgaggct cgggcttactgcgagaaggaaggggcagagctggctaccacagggcagctgtacgtggcg tggagcaagggtatggacagctgcaaccctggctggctgtctgatggcagtgtgcggtac cccatcatcatccctagggagcgctgtggagggcctcaggcaggggtcaagaccctgtat cgctacagcaaccagacaggcttccctgaatcatccagccgccatgatgtttactgtttc agaggtgttgggaatcctcacactgatgcccccatggactacatggccactgagccagag gacatcggacaagatattgtcgttcttatggagcttgctgaggagctctatctgagccag gatagcaagcaagtggagcgagaggcccagagtgtcctgggatccctccctgtcttccag tcggctcctgctcaggaggatctgcaggggactccccctactgccctgtcaagcacagag gtccccctcacccatacagcctcttcccaggaccttctccagccctttgatgagacttca cttcctgtagaggaaaactaccactcccagcatgctacttcactacccaacacctccagt gagccagactccctccacgaaagagactatcactcccagaattctagttccatacccagc acctccactaagccagactccctccacgaaggagattatcactcccagaattctagttcc atacccagcacctccactaagccagactccctccacgaaggagattatcactcccagaat tctagttccatacccagcacctccactaagccagactccctctatgaaggagattatcac tcccagaattctagttccatacccagcacctccactaagccagactccctccacgaagga gattatcactcccagaattctatttccatacccagcacctccagtgtgccagactccgtc tatgaaggagactatcactcccagaattatatttccatacccagcacctccagtgagcca gactccctccacgaaagagactatcactcccagaattctagttcactacccagcacctcc agtaagccagactccctccacgaaggagactatcactcccagaattctacttcactaccc agcacctccagtgagccagtctccctccacgaaggagacaatcactcccagaattctact tcactacctaacacctccagtgagccagactccctccacgaaggagactatcactcccag aattctacttcactacccagcacctccagtgagccagtctccctccatgaaggagacaat cactcccagaattctacttcactacccaacacctccagtgagccagactccctccacgaa ggagactatcactcccagaattctacttcactacccagcacctccagtgagccagactcc ctccacgaaggagactatcactcccagaattctacttcactacccagcacctccagtgag ccagactccctccatgaaggagactatcactcacacaattctacttcactacccaacacc tccagtgagccagactctctccacgaaggagactatcactcacaaaattctacttcacta cccagaacctctagtgttctagactctctccacgaaggcaattccagtctctaccggcta gtgctggaaacagccccagaattccctgagccgtcctacgagccacacagacattaccag ccgatgccagagatgaacccggaggaaactgactaccaacagtcaggatcttccaagcac ttccagccaatgccagagaccaatctcgagttggatcaagtggaagccaactacagcaca acaggaggtaaccagagtcatcgggagaatacaaaagagactaccacaatggcctttgaa cccatagagaatgctaccgaggcacgtgaccatgccgcagagagaagacacaaagaggtg atcgtgggagagcctgaggagacatccatctctaccaagtccccgggagagcttgatccc cgcccagcatggtctaccctctccccccacgcaaaggcaacctcagtgtggtcgcccctg gatggatctggagatgtgtcccaagagatagaactagttgtccaccagggaatccacaca gacagattccccacctcctcctcctcctcctcctcctcctcctcttcctcctccttcacc actcacatgtctgcctcccctggagccaccagcattcccagtgaggagcagacaggagtt acgcattcaagcagcatcttatcgggactggatcattcggaggagctaggactggatgtg tactccacagtaggccatccaaaagtaacctcgcagggaacttcctccgctaggctggag ggcagcaccagtctagattttgagggtatcgtcattccagagagattggtaccttctaga gaagtggagctggcaccaggggagtctgatgaggagcacctggggtctggagagggcata gccactaccgagtctccagacctctccaccacctcccagctgtccgtcgagtttaccact ctgggctatcaaacaacgaccatgtccagaatagagatggatcccacaaccacggaccct gaagaagacggaaatggacatgagccaagcactgatgaaccatccctgggagaaaaagtg accgtcttcccccttgagtcgcaaacatccagctgggatctgcaccgaaccacctctgca ccccaagagtctcaggaagaccttgaatacagcggggaacccctttccacctcttcccag acagatcttccagactcctcagaagaacctgatctgtttgggtcagactccttgtccacc tcaagtacggatcccaccgcagccaccatgtccacatccaccatgtacacctccacagag tgggccacacggacctggagccccaccacctccacgacacaaggtcccccagaaacatct gagccggagagggtgacggctcttatgccccccgtggatcagggccggttggatctggaa ttcggcctcacccagccacccaccctgctcatgttgcccaatgagagggctgccgtgggc agtgccaggaagatttcagatgcctgtctggaggacccctgtgccaacggcggcacctgc gttgagatgggcgggagcaccaaatgcctctgtttgcccagctatggaggtgacctctgt cagacagatctggagcagtgtgaggtgggctggcagaagttccacgggaactgctacaag cacttcaaccagcggctgagctgggaggtggcggagcagcactgtcgcatggtggggggc cacctggcgtcaatcatgacacctgaagagaaggacttcattaacaataactttaaggag tatcagtggacgggactaaacgacaagacaatcgagggggatttccactggtccgatggc aacccactgctctatgagaactggtacaggggccagcctgacagttacttcctgtctgga gaggactgtgtggtgatggtatggcatgattctgggcactggagtgacgtgccctgcaac taccacctggcctacacctgcaagaaaggcacctcttcatgtggccctccccccaaagtc cgaaacgcactcgcgtttggcaaaattcgccagaggtacgagacgggcgccgttgtgcgc tactactgtgcccagggcttccagcagagacgaaactctctggccgtgtgcctgccgggt ggcaagtgggaggagccgcagatcctctgcatccctggggcaggaagcacagcacagaca gtaggagtaacatcactaaccacaggaagccaggagctggctgaagaggaatcacaaaca acaaaggaaacgcttcaatactgggacatcaagtggaacttttaa

DBGET integrated database retrieval system