Oncorhynchus nerka (sockeye salmon): 115108628
Help
Entry
115108628 CDS
T07952
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108628 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115108628 (tmco1)
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
115108628 (tmco1)
Transporters [BR:
one02000
]
Other transporters
Pores ion channels [TC:
1
]
115108628 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF2368
DUF6809
Vpu
DUF5683
Exonuc_VII_L
DivIC
DUF4257
DUF2207_C
Peptidase_S49_N
Nucleoside_tran
ATG14
Motif
Other DBs
NCBI-GeneID:
115108628
NCBI-ProteinID:
XP_029489043
EnsemblRapid:
ENSONEG00000033580
LinkDB
All DBs
Position
LG24:59961084..59966669
Genome browser
AA seq
188 aa
AA seq
DB search
MTTMFADTILIVFISVCTALLAEGITWVLVYRTAKYKSLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLLGEDFTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgttcgcagacactattcttattgtgttcatctctgtttgcacagctctg
ttagctgagggaattacatgggtgttggtgtatcgtactgcaaagtacaagagtctgaag
gcagaggtggaaaagcaaagcaagaaattggagaagaagaaggaaaccattacagaatct
gcaggacgtcaacagaagaagaagattgagagacaagaggagaaactgaagaacaacaac
agagatctatccatggtacgaatgaagtccatgttcgccattggcttctgtttcacagcg
ttgatgggaatgttcaactccatctttgatggaagggtggtggccaaactgccattcgtc
ccactgtcctacattcagggtctttcccatcgcaaccttttgggcgaggacttcactgac
tgctcattcatcttcctgtacattctctgcaccatgtccatcagacagaacatccagaag
atgctgggtctggccccctccagagctgccaccaagcaggctggaggtttcttgggaccc
cctccccaggcagctaagttctcctaa
DBGET
integrated database retrieval system
