Oreochromis niloticus (Nile tilapia): 100711833
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Entry
100711833 CDS
T06104
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04260
Cardiac muscle contraction
onl04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100711833
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
100711833
04261 Adrenergic signaling in cardiomyocytes
100711833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100711833
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100711833
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
100711833
NCBI-ProteinID:
XP_005451718
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Position
LG17:complement(10577078..10680212)
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AA seq
1105 aa
AA seq
DB search
MNCWSLGKAGNAIKLDRSGPYSGRLMMLMWIILSSSLCLMTDGQMKISPETVQQWAVSFG
KEITALSARYSGAKLLQKKYKDIEGTVKIEEVNGDELVKRFAEEMEEMLGRKMKAVKRLA
EAAEDADLDHEYNETLEFDYYNSMLINTVDEDGNPVPLGGEFPLEENEHFNKLPVNIQQS
NIQVPTNVYNRDPDILNGVFMSEALNDVFADNFQEDPTLTWQYFGSSTGFFRLYPGIQWT
PDENGVVTFDCRNRNWYIQAATSPKDVVIVVDVSGSMKGLRLTIAKHTINTILDTLGEND
FVNIIAYSDYVRYVEPCFQGTLVQADLDNREHFKLLVEELHVKGEGKVKKAMKESFRILN
EATALGQGSLCNQAIMLITDGAMEDFQDVFQEFNWPERRVRVFTYLIGREMTFAENVKWI
ACNNKGYYTHVSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSVLFNTQAQSLL
LMTSVAMPVFSKKRETLSHGILLGVVGTDVALRELMRLATRYKLGIHGYAYLITNNGYIL
SHPDLRPLYKEGKKLKPKPNYNSVDLSEVEWEDSEEKLRTAMVKGETGNLSLDVKTSVDK
GRRVMFLKNDYYYTVINETPFSLGIVLSQGYGQYIFIGNVSVEEGLHDLLAPDLTIANEW
TYCETDIDPAHRKLSQLQAVERYLTGKEPGLECDMQLLQQTLFDAVVTAPMEAYWNALML
NVSGMDEGIETAFLGTRSGLIRFLRYTGIEKRIGKSFLTSTDKENMFTLDHFPVWYRRAA
EYPAGKFLYYMPRQDTRAGRIVIAATAVTVTVGKKTALAGAIGVQMTLEVIESRFWGIAA
QPNDTDCSNVEGICPLRCDSLDIECYVIDNNGFVLISEQRNDAGRFFGEIDGSVMSTLIR
MGMFKRVSLFDYQAMCKMNSHSVSSARPLLSPFYGLASALKWFLSNFLLFLLEFNICGFW
HTEHFADASVHKKKGDILQPCDTEYPSFVYEPSVKETNSIIKCGRCQKMFVVQQIPESNL
LMLVVQADCDCSKQYPPITLEPEEVRYNSSVKCDRMKSQKVRRRPESCHSYHAQENADDC
GGASFISPSTSVFFMCLLFAALVSR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctggagtctgggaaaagctgggaatgccattaaattagatagaagtgggcca
tacagcgggaggctgatgatgctgatgtggattatcctctccagctcgctgtgcctcatg
actgatggtcaaatgaagatctcaccagaaacggtgcagcagtgggccgtgtcatttggc
aaagagataactgctttgtccgccaggtactctggagctaaacttctgcagaagaaatac
aaggatattgaaggtacagtgaagatagaggaggtgaatggagacgaactggtgaaaagg
tttgcggaagaaatggaagagatgcttgggaggaagatgaaagctgttaagagattagca
gaagcagcagaggatgcagatctggaccatgagtacaatgaaacacttgagtttgactat
tataactccatgttgatcaacactgtggatgaggatgggaatccagtcccactgggtgga
gaattccctttggaggaaaacgaacattttaataaactgccagtcaacatacagcaaagt
aacatacaagttcccacaaatgtctacaacagagatcctgatattctcaatggagtcttc
atgtctgaggctctgaacgatgttttcgctgataacttccaggaggatccaactctcacc
tggcagtactttggcagttctacgggctttttcaggctatatccaggcatccaatggact
ccagatgaaaacggtgtcgtcacatttgattgcagaaacagaaactggtatatacaagca
gccacatctcctaaagatgtagtaatcgtcgtggatgtcagtggcagcatgaagggactc
agactgacaatagccaagcacaccattaatacaatcctggacaccctgggagaaaatgac
tttgttaacatcatagcttacagtgactatgttcgctacgtggagccctgcttccagggc
acgctagtacaggctgatctggataaccgagagcatttcaagcttttggtggaagagctt
catgtgaaaggagagggcaaagtaaaaaaagcaatgaaggagtctttcaggattctcaat
gaggctactgcactggggcagggcagcctgtgtaaccaggcaatcatgctgataacagac
ggagccatggaggacttccaggatgtttttcaagagtttaactggccggaacgacgggtt
cgagtgttcacctatttgattggacgggagatgacgtttgctgaaaatgtcaaatggatt
gcctgcaacaacaagggttattacactcatgtctcaacactggctgatgtccaggaaaac
gttatggagtacctccatgttctgagccggccaatggtcatcaaccacgatcatgacatc
atttggactgaggcctatatggacagcgtgctgtttaacactcaggcacaaagcctgctc
ctaatgacctcagtagccatgcctgtgttcagcaagaagagagagactttatctcacggg
attctactgggagtggtaggaactgatgttgccttgagagaactgatgagattagctaca
agatacaagctgggtatccatggctacgcctacctcatcaccaataatgggtacatcctg
tctcatcctgacctgcgacctctgtataaagagggtaagaagctaaagcctaaacccaac
tacaacagcgtggatctgtcagaagtggaatgggaagacagcgaagaaaaactgaggacc
gccatggttaaaggagaaaccggaaacttgtctttagatgtgaaaacttcagtcgataaa
ggaagaagagtgatgttcctgaagaatgattactactatactgtcatcaatgagacacca
ttcagtctgggtatagtgttgagtcaaggatatggacagtatatcttcataggaaatgtc
tctgttgaggagggtcttcacgacttattggctcctgatctgaccatagccaacgagtgg
acctactgtgagacagacattgacccagcacaccgcaagctgagtcagcttcaagctgtg
gaacgatacctcacgggcaaagaaccaggtctggagtgtgatatgcagctgctgcaacaa
acgctgtttgatgctgtggtcacggctcccatggaagcttactggaacgcccttatgctc
aacgtatccggtatggatgagggaattgaaacagcattcttagggacccgttcaggcctc
ataaggtttctgaggtataccggtatcgagaaaagaattggcaagtctttcctgacctcc
acagacaaggagaatatgttcaccctggaccatttcccagtgtggtaccgcagagcagct
gagtacccagctggaaagtttctatattacatgcccagacaggacactagagcagggagg
atcgtgattgctgccactgctgtcactgtgacggtgggcaagaaaactgcacttgctgga
gccatcggggtccagatgactctggaggtgattgaatccagattttggggcattgcagca
cagccaaatgacacagattgctcaaatgtggaggggatttgtcctcttcgctgtgacagc
ttagatatcgagtgctatgtgattgacaataatggctttgtcctcatttctgaacagcgc
aatgacgcgggaaggttctttggtgagattgatggctcagtgatgagcacgttgatcagg
atgggcatgttcaaaagggtatccttgttcgactaccaggccatgtgtaagatgaactcg
cactctgtcagcagcgcacgtccactcctcagtccattctacggtttggcttcagccctc
aagtggttcctctccaacttcctactatttctcctggagttcaatatctgtggcttctgg
cacacggagcattttgctgacgcctcagttcataagaaaaaaggggacatcctgcagccg
tgtgacaccgagtaccccagctttgtttatgagccgtcagtcaaagagaccaacagcatt
attaagtgcggacgatgccagaagatgtttgtagtgcagcagataccagagagcaacctg
ttgatgctggtggtgcaagcagactgtgactgctccaaacagtacccacccatcaccctg
gagccagaagaagtcagatataactcgtcagtgaagtgtgacaggatgaagtctcaaaag
gttcgcagacgccccgagtcttgtcactcttatcacgcgcaggagaacgccgatgactgt
ggaggagcctcttttatatctccgtcaacctctgttttcttcatgtgtctcctttttgct
gcacttgtttcccgatga
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