Photorhabdus akhurstii: B0X70_03590
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Entry
B0X70_03590 CDS
T07392
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0X70_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pakh03019
]
B0X70_03590
Messenger RNA biogenesis [BR:
pakh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B0X70_03590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QXF32342
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Position
824193..824723
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELYEEVGL
GRKDVRVLASTRNWLRYKLPKRLVRWDTRPVCIGQKQRWFLLQLLCNEEDINVQHSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSVVMPMQESSSLPRSSYSYRRKRS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcggcaaggc
caggttttgtgggcgcggcgttatgggcagcattcctggcaatttcctcaagggggcatt
aatccgggggaatcaccagaacaggctatgtaccgggaactgtatgaagaagtgggttta
ggtcggaaagatgtacgcgttctggcttctactcgtaattggttgcgttacaaattaccc
aagcgtttggtgcgttgggatactcgacctgtctgtatcggtcaaaaacagcggtggttt
ttattacaactgctctgtaatgaagaagatattaatgtgcaacacagtaataccccggag
ttcgatggttggcgttgggtcagctattggtatcctgtccggcaggttgtctcttttaag
cgtgatgtttatcggcgcgtgatgaaagagttttcttcggttgtcatgccaatgcaggaa
agctcatctctgccacgttcttcgtattcttatcgtcgcaaaagaagttag
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