Providencia alcalifaciens: CO695_08175
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Entry
CO695_08175 CDS
T05107
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pala
Providencia alcalifaciens
Pathway
pala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CO695_08175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pala03019
]
CO695_08175
Messenger RNA biogenesis [BR:
pala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CO695_08175
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ATG16272
UniProt:
A0A291EAT4
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All DBs
Position
1767303..1767836
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AA seq
177 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELYEEVGL
QRKDVRLLASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLQCNDADINVQRSKSPE
FDGWRWVSYWYPVRQVVSFKREVYRRVMKEFAPVVMPLQEQKLPQRPVFNNRRRGVK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcggcaaggt
caagtcttatgggctcgccgttatggtcagcattcttggcaatttcctcaaggtgggatt
aaccctggggaatcgccagaacaagcgatgtatcgtgagttatacgaggaagtcggacta
cagcgtaaagatgtcaggttacttgcatctacccgtaattggttacgctacaaattacct
aagcgtttggtgcgttgggatacaaaacctgtttgtattggacagaaacaacgttggttt
ttacttcaactccaatgtaatgacgccgatataaatgtgcagcgcagtaaatcgccagaa
tttgacggctggcggtgggtcagttattggtatcctgttaggcaagtggtttcttttaaa
cgtgaagtttatcggcgtgttatgaaggaattcgcccccgtggttatgcctttgcaggaa
caaaaattaccacaacgacctgtttttaataatcgtaggcgcggagtcaaataa
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