Pseudomonas atacamensis: JWU58_13140
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Entry
JWU58_13140 CDS
T07336
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata02020
Two-component system
Module
pata_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWU58_13140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_13140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_13140
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_13140
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_13140
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
JWU58_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QSL90188
LinkDB
All DBs
Position
complement(2882563..2883858)
Genome browser
AA seq
431 aa
AA seq
DB search
MINRAPSRLTLIAMLCGLTGTAHASGFFDDAKSDVLLRNFYLSNDYRSPTPSGKNYKQEW
AQGFIGSFSSGFTEGAVGFGIDAHAFAGLKLDGGKGHSGTGLLPVDSDGRSENNYSSAGG
AFKLKVSRTTLAFGEMTVETPVFDTSDKRLQPEYATGFLLNSAEFDNVNLLAGHFTAFKN
QDSSSGKGDFYGYGANTEAGGISFVGADLFSSSPIGGALYASELSDTWHQYYGNLHFKQS
GVLLDANLYHTRDTGRALAGEIDNSAFSLSGKYSFGPHAVMLGWQRINGDTPFDFVGGDS
IYLANSIKYADFNGANERSWQARYDFDLGAFGIPGLNFMTRYVSGSHIDGTHAPKGGAYN
PFDADSGDYQPQQGSGGKHWERDIDLKYVVQSGAAKDLSVQLSHVTHRANEAQAGDDIDR
IYVVIQYPLGF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccgcgccccctcccgcctcaccctgattgccatgctctgcggtctgaccggc
accgcccacgccagcggctttttcgacgacgccaaaagcgatgtcctgctgcgcaacttc
tacctcagcaacgactaccgctcgcccacaccctccgggaaaaactacaaacaggaatgg
gcacaaggctttatcggcagcttctcatccggtttcaccgagggcgcagtcggtttcggc
atcgacgcgcacgctttcgccggcctgaaactcgacggcggcaagggccattccggcacc
ggtctgttaccggtcgatagcgatggtcgcagtgaaaacaactattccagcgctggcggt
gcgttcaagctcaaggtctcgcgaaccaccctcgccttcggagaaatgaccgtagaaacc
ccggtcttcgacacctccgacaaacgcctgcaaccggaatacgctacaggctttttgctc
aacagcgccgagttcgacaacgtcaatctgctcgccgggcatttcaccgcgttcaagaac
caggacagctcctccggcaaaggcgacttctacggctacggcgccaacaccgaagcgggt
ggcatcagcttcgtcggtgccgacctgttcagctcaagcccgatcggcggcgcactctac
gcctcagaactgagcgacacctggcaccagtattacggcaacctgcacttcaaacagtcc
ggtgtgctgctcgacgccaacctctaccatacccgcgacaccggccgcgcattggccggc
gagatcgacaacagcgccttcagcctctccggcaaatacagcttcggtccgcacgcggtg
atgctcggctggcagcgcatcaatggcgacacgccgttcgatttcgtcggcggcgactcg
atctacctcgccaattcgatcaaatacgccgacttcaacggcgccaacgaacgctcctgg
caagcccgttacgacttcgatctcggcgccttcggcatccccggcctgaacttcatgacc
cgctacgtcagcggcagccacatcgacggaacgcacgcgcccaagggcggcgcctacaat
ccgttcgacgccgacagcggcgactatcaaccgcaacaaggcagcggcggcaagcactgg
gaacgcgacatcgacctgaaatatgtcgtgcagtccggcgccgcgaaggatctgtcggtg
cagctatcgcacgtcacccaccgcgccaacgaagcgcaggctggcgatgatattgaccgg
atttacgtggtcattcagtacccgctgggtttctga
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