KEGG   PATHWAY: afz04146
Entry
afz04146                    Pathway                                
Name
Peroxisome - Antechinus flavipes (yellow-footed antechinus)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
afz04146  Peroxisome
afz04146

Other DBs
GO: 0005777
Organism
Antechinus flavipes (yellow-footed antechinus) [GN:afz]
Gene
127540054  peroxisomal biogenesis factor 16 [KO:K13335]
127562281  peroxisomal biogenesis factor 3 [KO:K13336]
127559703  peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
127559487  ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
127564384  peroxisome biogenesis factor 1 [KO:K13338]
127561758  peroxisome biogenesis factor 6 [KO:K13339]
127539281  peroxisome assembly protein 26 [KO:K13340]
127562251  peroxisomal biogenesis factor 7 [KO:K13341]
127552902  PEX5-related protein isoform X1 [KO:K13342]
127539199  peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
127555887  peroxisomal membrane protein PEX14 [KO:K13343]
127548113  peroxisome biogenesis factor 13 isoform X1 [KO:K13344]
127559005  peroxisome assembly protein 12 isoform X1 [KO:K13345]
127555984  peroxisome biogenesis factor 10 [KO:K13346]
127543747  peroxisome biogenesis factor 2 [KO:K06664]
127545348  peroxisomal membrane protein 2 isoform X1 [KO:K13347]
127545222  mpv17-like protein 2 [KO:K13348]
127548733  protein Mpv17 [KO:K13348]
127538968  mpv17-like protein [KO:K13349]
127550327  peroxisomal membrane protein 4 isoform X1 [KO:K13350]
127551394  peroxisomal membrane protein 11A [KO:K13351]
127559165  peroxisomal membrane protein 11B [KO:K13352]
127545338  peroxisomal membrane protein 11C [KO:K13353]
127538362  peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
127539116  2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
127556387  alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
127539474  phytanoyl-CoA dioxygenase, peroxisomal [KO:K00477] [EC:1.14.11.18]
127541497  peroxisomal acyl-coenzyme A oxidase 3 [KO:K00232] [EC:1.3.3.6]
127560452  peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
127550706  peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
127563309  sterol carrier protein 2 [KO:K08764] [EC:2.3.1.176]
127554786  bile acid-CoA:amino acid N-acyltransferase [KO:K00659] [EC:2.3.1.65 3.1.2.2]
127563515  peroxisomal bifunctional enzyme isoform X1 [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
127549733  3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
127542961  peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] isoform X1 [KO:K13237] [EC:1.3.1.124]
127556153  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 [KO:K12663] [EC:5.3.3.21]
127543052  ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
127539134  ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
127549506  lysosomal cobalamin transporter ABCD4 isoform X1 [KO:K05678] [EC:7.6.2.8]
127551139  long-chain fatty acid transport protein 2 [KO:K08746] [EC:6.2.1.- 6.2.1.3]
127549837  long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
127542541  long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
127551584  long-chain-fatty-acid--CoA ligase 5 [KO:K01897] [EC:6.2.1.3]
127546274  LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 5-like [KO:K01897] [EC:6.2.1.3]
127553051  fatty acid CoA ligase Acsl3 isoform X1 [KO:K01897] [EC:6.2.1.3]
127541130  long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
127553135  peroxisomal trans-2-enoyl-CoA reductase isoform X1 [KO:K07753] [EC:1.3.1.38]
127544216  enoyl-CoA delta isomerase 2 isoform X1 [KO:K13239] [EC:5.3.3.8]
127547975  peroxisomal coenzyme A diphosphatase NUDT7 [KO:K17879] [EC:3.6.1.77]
127560393  NAD-capped RNA hydrolase NUDT12 [KO:K03426] [EC:3.6.1.22]
127551929  NAD(P)H pyrophosphatase NUDT13, mitochondrial [KO:K03426] [EC:3.6.1.22]
127550645  acyl-coenzyme A diphosphatase NUDT19 [KO:K13355] [EC:3.6.1.77]
127550769  acyl-coenzyme A thioesterase 8 [KO:K11992] [EC:3.1.2.27]
127550879  carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
127563963  peroxisomal carnitine O-octanoyltransferase [KO:K05940] [EC:2.3.1.137]
127548679  malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
127559684  dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
127554525  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
127537831  fatty acyl-CoA reductase 2 isoform X1 [KO:K13356] [EC:1.2.1.84]
127539760  fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
127545600  mevalonate kinase isoform X1 [KO:K00869] [EC:2.7.1.36]
127559848  phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
127558364  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
127545588  D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
127562090  D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
127551400  isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
127553164  isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
127559976  isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
127558900  peroxisomal sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
127555710  hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [KO:K01640] [EC:4.1.3.4]
127561872  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic [KO:K01640] [EC:4.1.3.4]
127559199  LOW QUALITY PROTEIN: 2-Hydroxyacid oxidase 2 [KO:K11517] [EC:1.1.3.15]
127548501  2-Hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
127539793  catalase [KO:K03781] [EC:1.11.1.6]
127540991  peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
127553844  superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
127562376  superoxide dismutase [Mn], mitochondrial isoform X1 [KO:K04564] [EC:1.15.1.1]
127558946  nitric oxide synthase, inducible isoform X1 [KO:K13241] [EC:1.14.13.39]
127563411  peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
127548796  bifunctional epoxide hydrolase 2 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
127548797  bifunctional epoxide hydrolase 2-like [KO:K08726] [EC:3.3.2.10 3.1.3.76]
127539283  glutathione S-transferase kappa 1-like isoform X1 [KO:K13299] [EC:2.5.1.18]
127539284  glutathione S-transferase kappa 1 isoform X1 [KO:K13299] [EC:2.5.1.18]
127548630  xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
127551069  dehydrogenase/reductase SDR family member 4-like isoform X1 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
afz00071  Fatty acid degradation
afz00120  Primary bile acid biosynthesis
afz00230  Purine metabolism
afz00564  Glycerophospholipid metabolism
afz00565  Ether lipid metabolism
afz00830  Retinol metabolism
afz00900  Terpenoid backbone biosynthesis
afz03320  PPAR signaling pathway
KO pathway
ko04146   
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