KEGG   PATHWAY: bdi00250
Entry
bdi00250                    Pathway                                
Name
Alanine, aspartate and glutamate metabolism - Brachypodium distachyon (stiff brome)
Class
Metabolism; Amino acid metabolism
Pathway map
bdi00250  Alanine, aspartate and glutamate metabolism
bdi00250

Module
bdi_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:bdi00250]
Other DBs
GO: 0006522 0006531 0006536
Organism
Brachypodium distachyon (stiff brome) [GN:bdi]
Gene
100824909  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
100826634  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
100833284  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
100831644  aspartate aminotransferase P2, mitochondrial [KO:K00811] [EC:2.6.1.1]
100840441  L-aspartate oxidase, chloroplastic [KO:K00278] [EC:1.4.3.16]
100845946  isoaspartyl peptidase/L-asparaginase 1 isoform X1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
100840890  isoaspartyl peptidase/L-asparaginase 1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
100838056  probable isoaspartyl peptidase/L-asparaginase 2 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
100830770  asparagine synthetase [glutamine-hydrolyzing] 1 [KO:K01953] [EC:6.3.5.4]
100830419  asparagine synthetase [glutamine-hydrolyzing] 2 isoform X2 [KO:K01953] [EC:6.3.5.4]
100839462  asparagine synthetase [glutamine-hydrolyzing] isoform X2 [KO:K01953] [EC:6.3.5.4]
100833460  omega-amidase, chloroplastic [KO:K13566] [EC:3.5.1.3]
100833757  omega-amidase, chloroplastic [KO:K13566] [EC:3.5.1.3]
100842828  alanine aminotransferase 2 isoform X1 [KO:K00814] [EC:2.6.1.2]
100825019  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
100824435  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
100825995  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
100842260  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
100845801  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
100846647  alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
100821851  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
100824380  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
100844005  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
100844015  argininosuccinate synthase, chloroplastic [KO:K01940] [EC:6.3.4.5]
100828562  argininosuccinate lyase, chloroplastic isoform X2 [KO:K01755] [EC:4.3.2.1]
100843709  adenylosuccinate synthetase, chloroplastic [KO:K01939] [EC:6.3.4.4]
100841380  adenylosuccinate synthetase 2, chloroplastic isoform X1 [KO:K01939] [EC:6.3.4.4]
100825138  uncharacterized protein LOC100825138 [KO:K01756] [EC:4.3.2.2]
100827799  aspartate carbamoyltransferase, chloroplastic [KO:K00609] [EC:2.1.3.2]
100832185  glutamate decarboxylase 1 [KO:K01580] [EC:4.1.1.15]
100831298  glutamate decarboxylase 1 [KO:K01580] [EC:4.1.1.15]
100827187  glutamate decarboxylase [KO:K01580] [EC:4.1.1.15]
100831497  glutamate decarboxylase [KO:K01580] [EC:4.1.1.15]
100832399  glutamate decarboxylase 2 [KO:K01580] [EC:4.1.1.15]
100831754  probable gamma-aminobutyrate transaminase 3, mitochondrial isoform X2 [KO:K16871] [EC:2.6.1.96]
100839166  gamma-aminobutyrate transaminase 1, mitochondrial [KO:K16871] [EC:2.6.1.96]
100839823  succinate-semialdehyde dehydrogenase, mitochondrial [KO:K17761] [EC:1.2.1.24]
100832857  glutamate synthase 1 [NADH], chloroplastic [KO:K00264] [EC:1.4.1.14]
100844360  glutamate synthase 2 [NADH], chloroplastic isoform X2 [KO:K00264] [EC:1.4.1.14]
100831066  glutamate dehydrogenase 1, mitochondrial [KO:K00261] [EC:1.4.1.3]
100828452  glutamate dehydrogenase 2, mitochondrial [KO:K00261] [EC:1.4.1.3]
100833076  NADP-specific glutamate dehydrogenase [KO:K00262] [EC:1.4.1.4]
100831540  delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [KO:K00294] [EC:1.2.1.88]
100824429  glutamine synthetase cytosolic isozyme 1-2 [KO:K01915] [EC:6.3.1.2]
100842712  glutamine synthetase, chloroplastic [KO:K01915] [EC:6.3.1.2]
100837122  glutamine synthetase cytosolic isozyme 1-3 [KO:K01915] [EC:6.3.1.2]
100845598  glutamine synthetase cytosolic isozyme 1-1 [KO:K01915] [EC:6.3.1.2]
100839092  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
100834202  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
100841284  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 isoform X1 [KO:K00820] [EC:2.6.1.16]
100841735  amidophosphoribosyltransferase, chloroplastic [KO:K00764] [EC:2.4.2.14]
100836433  amidophosphoribosyltransferase, chloroplastic [KO:K00764] [EC:2.4.2.14]
Compound
C00014  Ammonia
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00041  L-Alanine
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00122  Fumarate
C00152  L-Asparagine
C00158  Citrate
C00169  Carbamoyl phosphate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00352  D-Glucosamine 6-phosphate
C00402  D-Aspartate
C00438  N-Carbamoyl-L-aspartate
C00940  2-Oxoglutaramate
C01042  N-Acetyl-L-aspartate
C02362  2-Oxosuccinamate
C03090  5-Phosphoribosylamine
C03406  N-(L-Arginino)succinate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03912  (S)-1-Pyrroline-5-carboxylate
C12270  N-Acetylaspartylglutamate
C20775  beta-Citryl-L-glutamate
C20776  N-Acetylaspartylglutamylglutamate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Related
pathway
bdi00010  Glycolysis / Gluconeogenesis
bdi00020  Citrate cycle (TCA cycle)
bdi00220  Arginine biosynthesis
bdi00230  Purine metabolism
bdi00240  Pyrimidine metabolism
bdi00260  Glycine, serine and threonine metabolism
bdi00261  Monobactam biosynthesis
bdi00300  Lysine biosynthesis
bdi00330  Arginine and proline metabolism
bdi00340  Histidine metabolism
bdi00410  beta-Alanine metabolism
bdi00460  Cyanoamino acid metabolism
bdi00470  D-Amino acid metabolism
bdi00480  Glutathione metabolism
bdi00520  Amino sugar and nucleotide sugar metabolism
bdi00620  Pyruvate metabolism
bdi00630  Glyoxylate and dicarboxylate metabolism
bdi00650  Butanoate metabolism
bdi00660  C5-Branched dibasic acid metabolism
bdi00760  Nicotinate and nicotinamide metabolism
bdi00770  Pantothenate and CoA biosynthesis
bdi00860  Porphyrin metabolism
bdi00910  Nitrogen metabolism
KO pathway
ko00250   
LinkDB

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