KEGG   PATHWAY: bne00630
Entry
bne00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Brevundimonas naejangsanensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
bne00630  Glyoxylate and dicarboxylate metabolism
bne00630

Module
bne_M00012  Glyoxylate cycle [PATH:bne00630]
bne_M00621  Glycine cleavage system [PATH:bne00630]
bne_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bne00630]
Other DBs
GO: 0046487 0043648
Organism
Brevundimonas naejangsanensis [GN:bne]
Gene
DA69_08545  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
DA69_00585  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DA69_08210  malate synthase G [KO:K01638] [EC:2.3.3.9]
DA69_11885  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
DA69_03720  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
DA69_12055  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
DA69_13965  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DA69_08300  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DA69_13500  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DA69_05990  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
DA69_00290  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
DA69_08855  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
DA69_07290  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
DA69_07305  acetyl/propionyl-CoA carboxylase subuit alpha [KO:K01965] [EC:6.4.1.3]
DA69_07310  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
DA69_07295  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
DA69_07300  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
DA69_01695  catalase HPII [KO:K03781] [EC:1.11.1.6]
DA69_12975  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
DA69_05430  phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
DA69_02515  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
DA69_04975  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
DA69_05470  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
DA69_03360  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
DA69_08920  glycine dehydrogenase (aminomethyl-transferring) [KO:K00282] [EC:1.4.4.2]
DA69_08925  glycine dehydrogenase (aminomethyl-transferring) [KO:K00283] [EC:1.4.4.2]
DA69_08910  hypothetical protein [KO:K00605] [EC:2.1.2.10]
DA69_11100  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DA69_13680  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DA69_05775  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DA69_08915  glycine cleavage system protein H [KO:K02437]
DA69_11920  kinase [KO:K15918] [EC:2.7.1.31]
DA69_10455  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
DA69_10460  hypothetical protein [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bne00010  Glycolysis / Gluconeogenesis
bne00020  Citrate cycle (TCA cycle)
bne00030  Pentose phosphate pathway
bne00053  Ascorbate and aldarate metabolism
bne00071  Fatty acid degradation
bne00230  Purine metabolism
bne00250  Alanine, aspartate and glutamate metabolism
bne00260  Glycine, serine and threonine metabolism
bne00620  Pyruvate metabolism
bne00750  Vitamin B6 metabolism
bne00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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