KEGG   PATHWAY: byi00330
Entry
byi00330                    Pathway                                
Name
Arginine and proline metabolism - Burkholderia sp. YI23
Class
Metabolism; Amino acid metabolism
Pathway map
byi00330  Arginine and proline metabolism
byi00330

Module
byi_M00015  Proline biosynthesis, glutamate => proline [PATH:byi00330]
byi_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:byi00330]
byi_M00970  Proline degradation, proline => glutamate [PATH:byi00330]
Other DBs
GO: 0006525 0006560
Organism
Burkholderia sp. YI23 [GN:byi]
Gene
BYI23_A008960  cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
BYI23_A012840  5-oxoprolinase (ATP-hydrolyzing) [KO:K01473] [EC:3.5.2.14]
BYI23_D010830  5-oxoprolinase (ATP-hydrolyzing) [KO:K01473] [EC:3.5.2.14]
BYI23_C005210  N-methylhydantoinase A [KO:K01473] [EC:3.5.2.14]
BYI23_C005680  5-oxoprolinase (ATP-hydrolyzing) [KO:K01473] [EC:3.5.2.14]
BYI23_C007280  hydantoin utilization protein A [KO:K01473] [EC:3.5.2.14]
BYI23_A012830  5-oxoprolinase (ATP-hydrolyzing) [KO:K01474] [EC:3.5.2.14]
BYI23_D010820  5-oxoprolinase (ATP-hydrolyzing) [KO:K01474] [EC:3.5.2.14]
BYI23_C001650  N-methylhydantoinase B [KO:K01474] [EC:3.5.2.14]
BYI23_C005220  N-methylhydantoinase B [KO:K01474] [EC:3.5.2.14]
BYI23_C005670  5-oxoprolinase (ATP-hydrolyzing) [KO:K01474] [EC:3.5.2.14]
BYI23_C007270  hydantoin utilization protein B [KO:K01474] [EC:3.5.2.14]
BYI23_C008510  creatinase [KO:K08688] [EC:3.5.3.3]
BYI23_A006210  ornithine decarboxylase [KO:K01584] [EC:4.1.1.19]
BYI23_C002210  putative arginase [KO:K01480] [EC:3.5.3.11]
BYI23_E001570  hypothetical protein [KO:K00797] [EC:2.5.1.16]
BYI23_B002800  putative aminotransferase [KO:K12256] [EC:2.6.1.113]
BYI23_B010500  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_A020160  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_C009740  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_C012780  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_C009260  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_C012180  betaine-aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_C010710  putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_D005810  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_B006120  badh; betaine aldehyde dehydrogenase (badh) [KO:K00128] [EC:1.2.1.3]
BYI23_E003810  putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BYI23_A006420  agmatinase [KO:K12255] [EC:3.5.3.7]
BYI23_C000410  amidase [KO:K01426] [EC:3.5.1.4]
BYI23_D000510  putative amidotransferase [KO:K01426] [EC:3.5.1.4]
BYI23_C001580  Amidase [KO:K01426] [EC:3.5.1.4]
BYI23_D008000  amidase [KO:K01426] [EC:3.5.1.4]
BYI23_A013850  amidase [KO:K01426] [EC:3.5.1.4]
BYI23_B005900  amidase [KO:K01426] [EC:3.5.1.4]
BYI23_C008760  acetamidase/formamidase [KO:K01426] [EC:3.5.1.4]
BYI23_D005290  Amidase [KO:K01426] [EC:3.5.1.4]
BYI23_D005330  Acetamidase/Formamidase [KO:K01426] [EC:3.5.1.4]
BYI23_A009660  arginine N-succinyltransferase, alpha chain [KO:K00673] [EC:2.3.1.109]
BYI23_A009670  Arginine N-succinyltransferase beta subunit [KO:K00673] [EC:2.3.1.109]
BYI23_A009690  succinylarginine dihydrolase [KO:K01484] [EC:3.5.3.23]
BYI23_A009650  succinylornithine transaminase family protein [KO:K00840] [EC:2.6.1.81]
BYI23_A009680  succinylglutamic semialdehyde dehydrogenase [KO:K06447] [EC:1.2.1.71]
BYI23_A009700  succinylglutamate desuccinylase [KO:K05526] [EC:3.5.1.96]
BYI23_C009130  FAD dependent oxidoreductase [KO:K09471] [EC:1.4.3.-]
BYI23_B002480  aldehyde dehydrogenase [KO:K09472] [EC:1.2.1.99]
BYI23_D006610  aldehyde dehydrogenase [KO:K09472] [EC:1.2.1.99]
BYI23_B001730  aldehyde dehydrogenase (acceptor) [KO:K09472] [EC:1.2.1.99]
BYI23_C011800  BFD domain protein (2Fe-2S)-binding domain protein [KO:K24954]
BYI23_C011820  FAD dependent oxidoreductase [KO:K24955]
BYI23_D006600  NADP oxidoreductase coenzyme F420-dependent [KO:K00286] [EC:1.5.1.2]
BYI23_A003680  pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
BYI23_A026430  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase [KO:K13821] [EC:1.5.5.2 1.2.1.88]
BYI23_C008440  putA; bifunctional protein PutA [KO:K13821] [EC:1.5.5.2 1.2.1.88]
BYI23_C008480  1-pyrroline-5-carboxylate dehydrogenase [KO:K00294] [EC:1.2.1.88]
BYI23_C011230  1-pyrroline-5-carboxylate dehydrogenase [KO:K00294] [EC:1.2.1.88]
BYI23_A022620  gamma-glutamyl kinase [KO:K00931] [EC:2.7.2.11]
BYI23_A021980  gamma-glutamyl phosphate reductase [KO:K00147] [EC:1.2.1.41]
BYI23_B009360  hydrolase or acyltransferase [KO:K01259] [EC:3.4.11.5]
BYI23_D012160  ProCollegen-proline dioxygenase [KO:K00472] [EC:1.14.11.2]
BYI23_D000440  proCollegen-proline,2-oxoglutarate-4-dioxygenase [KO:K00472] [EC:1.14.11.2]
BYI23_A001610  aminotransferase class IV [KO:K00824] [EC:2.6.1.21]
BYI23_C008410  proline racemase [KO:K01777] [EC:5.1.1.4]
BYI23_C013030  proline racemase [KO:K01777] [EC:5.1.1.4]
BYI23_D009420  Proline racemase [KO:K01777] [EC:5.1.1.4]
BYI23_C003400  muconate lactonizing enzyme [KO:K21624] [EC:4.2.1.171]
BYI23_C005280  ornithine cyclodeaminase [KO:K19743] [EC:1.5.1.1]
BYI23_B003960  ornithine cyclodeaminase/mu-crystallin [KO:K19743] [EC:1.5.1.1]
Compound
C00012  Peptide
C00019  S-Adenosyl-L-methionine
C00022  Pyruvate
C00025  L-Glutamate
C00048  Glyoxylate
C00062  L-Arginine
C00077  L-Ornithine
C00086  Urea
C00134  Putrescine
C00148  L-Proline
C00179  Agmatine
C00213  Sarcosine
C00223  p-Coumaroyl-CoA
C00300  Creatine
C00315  Spermidine
C00334  4-Aminobutanoate
C00406  Feruloyl-CoA
C00431  5-Aminopentanoate
C00436  N-Carbamoylputrescine
C00441  L-Aspartate 4-semialdehyde
C00533  Nitric oxide
C00555  4-Aminobutyraldehyde
C00581  Guanidinoacetate
C00750  Spermine
C00763  D-Proline
C00791  Creatinine
C00884  Homocarnosine
C00986  1,3-Diaminopropane
C01035  4-Guanidinobutanoate
C01043  N-Carbamoylsarcosine
C01110  5-Amino-2-oxopentanoic acid
C01137  S-Adenosylmethioninamine
C01157  Hydroxyproline
C01165  L-Glutamate 5-semialdehyde
C01250  N-Acetyl-L-glutamate 5-semialdehyde
C01682  Nopaline
C02305  Phosphocreatine
C02565  N-Methylhydantoin
C02647  4-Guanidinobutanal
C02714  N-Acetylputrescine
C02946  4-Acetamidobutanoate
C03078  4-Guanidinobutanamide
C03166  Phosphoguanidinoacetate
C03287  L-Glutamyl 5-phosphate
C03296  N2-Succinyl-L-arginine
C03375  Norspermidine
C03415  N2-Succinyl-L-ornithine
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03912  (S)-1-Pyrroline-5-carboxylate
C04137  Octopine
C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
C05147  trans-3-Hydroxy-L-proline
C05931  N-Succinyl-L-glutamate
C05932  N-Succinyl-L-glutamate 5-semialdehyde
C05933  N(omega)-Hydroxyarginine
C05936  N4-Acetylaminobutanal
C05938  L-4-Hydroxyglutamate semialdehyde
C05945  L-Arginine phosphate
C05946  (4R)-4-Hydroxy-2-oxoglutarate
C05947  L-erythro-4-Hydroxyglutamate
C10497  Feruloylputrescine
C15699  gamma-L-Glutamylputrescine
C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
C15767  4-(L-gamma-Glutamylamino)butanoate
C18172  Carboxyspermidine
C18174  Carboxynorspermidine
C18326  p-Coumaroylputrescine
C19706  cis-3-Hydroxy-L-proline
Reference
PMID:5288244
  Authors
Haake P, Allen GW.
  Title
Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  Journal
Proc Natl Acad Sci U S A 68:2691-3 (1971)
DOI:10.1073/pnas.68.11.2691
Reference
PMID:16499623
  Authors
Kurihara S, Oda S, Kumagai H, Suzuki H.
  Title
Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  Journal
FEMS Microbiol Lett 256:318-23 (2006)
DOI:10.1111/j.1574-6968.2006.00137.x
Reference
PMID:15590624
  Authors
Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  Title
A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  Journal
J Biol Chem 280:4602-8 (2005)
DOI:10.1074/jbc.M411114200
Related
pathway
byi00020  Citrate cycle (TCA cycle)
byi00220  Arginine biosynthesis
byi00250  Alanine, aspartate and glutamate metabolism
byi00260  Glycine, serine and threonine metabolism
byi00270  Cysteine and methionine metabolism
byi00310  Lysine degradation
byi00410  beta-Alanine metabolism
byi00470  D-Amino acid metabolism
byi00480  Glutathione metabolism
byi00630  Glyoxylate and dicarboxylate metabolism
byi00650  Butanoate metabolism
byi00770  Pantothenate and CoA biosynthesis
KO pathway
ko00330   
LinkDB

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