KEGG   PATHWAY: cphy00630
Entry
cphy00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cnuibacter physcomitrellae
Class
Metabolism; Carbohydrate metabolism
Pathway map
cphy00630  Glyoxylate and dicarboxylate metabolism
cphy00630

Module
cphy_M00012  Glyoxylate cycle [PATH:cphy00630]
cphy_M00621  Glycine cleavage system [PATH:cphy00630]
Other DBs
GO: 0046487 0043648
Organism
Cnuibacter physcomitrellae [GN:cphy]
Gene
B5808_05785  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
B5808_17685  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
B5808_16760  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
B5808_05790  malate synthase A [KO:K01638] [EC:2.3.3.9]
B5808_14610  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B5808_15015  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
B5808_11085  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
B5808_09655  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
B5808_02845  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B5808_12890  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
B5808_12930  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
B5808_10210  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
B5808_03510  catalase [KO:K03781] [EC:1.11.1.6]
B5808_03705  hypothetical protein [KO:K01091] [EC:3.1.3.18]
B5808_00160  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
B5808_14685  hypothetical protein [KO:K01091] [EC:3.1.3.18]
B5808_09770  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
B5808_09880  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B5808_05205  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B5808_11160  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
B5808_11170  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
B5808_08420  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B5808_09745  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B5808_11165  glycine cleavage system protein H [KO:K02437]
B5808_02870  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
B5808_13890  glycerate kinase [KO:K00865] [EC:2.7.1.165]
B5808_00700  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B5808_18575  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B5808_01995  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B5808_10605  2-oxoglutarate dehydrogenase E1 component [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
B5808_08570  cupin [KO:K01569] [EC:4.1.1.2]
B5808_05195  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cphy00010  Glycolysis / Gluconeogenesis
cphy00020  Citrate cycle (TCA cycle)
cphy00030  Pentose phosphate pathway
cphy00053  Ascorbate and aldarate metabolism
cphy00071  Fatty acid degradation
cphy00230  Purine metabolism
cphy00250  Alanine, aspartate and glutamate metabolism
cphy00260  Glycine, serine and threonine metabolism
cphy00620  Pyruvate metabolism
cphy00750  Vitamin B6 metabolism
cphy00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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