KEGG   PATHWAY: cpra00970
Entry
cpra00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Collimonas pratensis
Class
Genetic Information Processing; Translation
Pathway map
cpra00970  Aminoacyl-tRNA biosynthesis
cpra00970

Organism
Collimonas pratensis [GN:cpra]
Gene
CPter91_0823  tRNA-Ala [KO:K14218]
CPter91_4298  tRNA-Ala [KO:K14218]
CPter91_4624  tRNA-Ala [KO:K14218]
CPter91_4988  tRNA-Ala [KO:K14218]
CPter91_1179  tRNA-Arg [KO:K14219]
CPter91_2349  tRNA-Arg [KO:K14219]
CPter91_3242  tRNA-Arg [KO:K14219]
CPter91_5422  tRNA-Arg [KO:K14219]
CPter91_1377  tRNA-Asn [KO:K14220]
CPter91_3173  tRNA-Asp [KO:K14221]
CPter91_5412  tRNA-Asp [KO:K14221]
CPter91_1690  tRNA-Cys [KO:K14222]
CPter91_0721  tRNA-Gln [KO:K14223]
CPter91_4296  tRNA-Glu [KO:K14224]
CPter91_4297  tRNA-Glu [KO:K14224]
CPter91_0464  tRNA-Gly [KO:K14225]
CPter91_1691  tRNA-Gly [KO:K14225]
CPter91_4532  tRNA-Gly [KO:K14225]
CPter91_1689  tRNA-Gly [KO:K14225]
CPter91_0054  tRNA-His [KO:K14226]
CPter91_4124  tRNA-His [KO:K14226]
CPter91_4989  tRNA-Ile [KO:K14227]
CPter91_4625  tRNA-Ile [KO:K14227]
CPter91_0822  tRNA-Ile [KO:K14227]
CPter91_1021  tRNA-Leu [KO:K14228]
CPter91_2081  tRNA-Leu [KO:K14228]
CPter91_2519  tRNA-Leu [KO:K14228]
CPter91_2983  tRNA-Leu [KO:K14228]
CPter91_3058  tRNA-Leu [KO:K14228]
CPter91_3181  tRNA-Leu [KO:K14228]
CPter91_3338  tRNA-Lys [KO:K14229]
CPter91_4164  tRNA-Lys [KO:K14229]
CPter91_1520  tRNA-Met [KO:K14230]
CPter91_1121  tRNA-Met [KO:K14230]
CPter91_1521  tRNA-Met [KO:K14230]
CPter91_4405  tRNA-Met [KO:K14230]
CPter91_4871  tRNA-Phe [KO:K14231]
CPter91_2276  tRNA-Pro [KO:K14232]
CPter91_3243  tRNA-Pro [KO:K14232]
CPter91_4886  tRNA-Pro [KO:K14232]
CPter91_1924  tRNA-Ser [KO:K14233]
CPter91_2382  tRNA-Ser [KO:K14233]
CPter91_3045  tRNA-Ser [KO:K14233]
CPter91_4118  tRNA-Ser [KO:K14233]
CPter91_0465  tRNA-Thr [KO:K14234]
CPter91_0777  tRNA-Thr [KO:K14234]
CPter91_4004  tRNA-Thr [KO:K14234]
CPter91_0467  tRNA-Trp [KO:K14235]
CPter91_0463  tRNA-Tyr [KO:K14236]
CPter91_2107  tRNA-Val [KO:K14237]
CPter91_3504  tRNA-Val [KO:K14237]
CPter91_5413  tRNA-Val [KO:K14237]
CPter91_4299  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CPter91_1747  amidase family protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CPter91_5124  gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CPter91_5126  gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CPter91_5123  gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CPter91_3931  glnS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
CPter91_3923  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
CPter91_0764  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CPter91_4428  glyQ; glycine--tRNA ligase, alpha subunit [KO:K01878] [EC:6.1.1.14]
CPter91_4429  glyS; glycine--tRNA ligase, beta subunit [KO:K01879] [EC:6.1.1.14]
CPter91_1975  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CPter91_1923  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CPter91_0956  selA; L-seryl-tRNA selenium transferase [KO:K01042] [EC:2.9.1.1]
CPter91_3050  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CPter91_0069  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CPter91_4303  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CPter91_5110  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CPter91_3207  formyl transferase, C-terminal domain protein [KO:K00604] [EC:2.1.2.9]
CPter91_0831  valS; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CPter91_4822  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CPter91_1209  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
CPter91_1392  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CPter91_5384  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CPter91_4855  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CPter91_2483  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CPter91_1979  pheS; phenylalanine--tRNA ligase, alpha subunit [KO:K01889] [EC:6.1.1.20]
CPter91_1980  pheT; phenylalanine--tRNA ligase, beta subunit [KO:K01890] [EC:6.1.1.20]
CPter91_4932  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CPter91_2158  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
CPter91_4775  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cpra00250  Alanine, aspartate and glutamate metabolism
cpra00260  Glycine, serine and threonine metabolism
cpra00270  Cysteine and methionine metabolism
cpra00290  Valine, leucine and isoleucine biosynthesis
cpra00300  Lysine biosynthesis
cpra00330  Arginine and proline metabolism
cpra00340  Histidine metabolism
cpra00380  Tryptophan metabolism
cpra00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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