KEGG   PATHWAY: cput04145
Entry
cput04145                   Pathway                                
Name
Phagosome - Coniophora puteana
Description
Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
Class
Cellular Processes; Transport and catabolism
Pathway map
cput04145  Phagosome
cput04145

Other DBs
GO: 0045335
Organism
Coniophora puteana [GN:cput]
Gene
CONPUDRAFT_136895  hypothetical protein [KO:K08492]
CONPUDRAFT_137006  protein transport protein Sec22 [KO:K08517]
CONPUDRAFT_44957  GTP-binding protein ypt5 [KO:K07889]
CONPUDRAFT_134397  GTP-binding protein RAB5 [KO:K07889]
CONPUDRAFT_100031  atypical PIKK PI3K protein kinase [KO:K00914] [EC:2.7.1.137]
CONPUDRAFT_68804  ubiquitin binding protein [KO:K12182]
CONPUDRAFT_48765  V-type ATPase [KO:K02145] [EC:7.1.2.2]
CONPUDRAFT_82082  V-type ATPase [KO:K02147]
CONPUDRAFT_95070  ATPase V1 complex subunit C [KO:K02148]
CONPUDRAFT_97752  vacuolar ATP synthase subunit D [KO:K02149]
CONPUDRAFT_147070  ATPase V1 A1 complex subunit E [KO:K02150]
CONPUDRAFT_119929  hypothetical protein [KO:K02153]
CONPUDRAFT_98646  ATPase V0 A0 complex 116-kDa subunit [KO:K02154]
CONPUDRAFT_123776  ATPase V0 complex subunit D [KO:K02146]
CONPUDRAFT_135126  ATPase V1 complex subunit H [KO:K02144]
CONPUDRAFT_124614  vacuolar ATP synthase 16 kDa proteolipid subunit [KO:K02155]
CONPUDRAFT_153503  V-type ATPase [KO:K02155]
CONPUDRAFT_81348  hypothetical protein [KO:K03661]
CONPUDRAFT_114884  hypothetical protein [KO:K07897]
CONPUDRAFT_42859  hypothetical protein [KO:K07897]
CONPUDRAFT_138359  cytoplasmic dynein intermediate chain [KO:K10415]
CONPUDRAFT_168928  hypothetical protein [KO:K10416]
CONPUDRAFT_81846  tubulin alpha [KO:K07374]
CONPUDRAFT_81847  tubulin alpha [KO:K07374]
CONPUDRAFT_163015  beta-tubulin 2 [KO:K07375]
CONPUDRAFT_84194  beta-tubulin 1 [KO:K07375]
CONPUDRAFT_134413  hypothetical protein [KO:K00921] [EC:2.7.1.150]
CONPUDRAFT_149441  mannose 6-phosphate receptor domain-containing protein [KO:K10089]
CONPUDRAFT_154904  SecY protein [KO:K10956]
CONPUDRAFT_85326  Pre protein translocase Sec Sec61-beta subunit [KO:K09481]
CONPUDRAFT_149076  protein translocase SEC6 [KO:K07342]
CONPUDRAFT_44846  Calreticulin-domain-containing protein [KO:K08054]
CONPUDRAFT_83020  NADPH oxidase B [KO:K21421] [EC:1.-.-.-]
Compound
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
Reference
  Authors
Stuart LM, Ezekowitz RA
  Title
Phagocytosis: elegant complexity.
  Journal
Immunity 22:539-50 (2005)
DOI:10.1016/j.immuni.2005.05.002
Reference
  Authors
Tjelle TE, Lovdal T, Berg T
  Title
Phagosome dynamics and function.
  Journal
Reference
  Authors
Dupuy AG, Caron E
  Title
Integrin-dependent phagocytosis: spreading from microadhesion to new concepts.
  Journal
J Cell Sci 121:1773-83 (2008)
DOI:10.1242/jcs.018036
Reference
  Authors
Brumell JH, Grinstein S
  Title
Salmonella redirects phagosomal maturation.
  Journal
Curr Opin Microbiol 7:78-84 (2004)
DOI:10.1016/j.mib.2003.12.005
Reference
  Authors
Huynh KK, Eskelinen EL, Scott CC, Malevanets A, Saftig P, Grinstein S
  Title
LAMP proteins are required for fusion of lysosomes with phagosomes.
  Journal
EMBO J 26:313-24 (2007)
DOI:10.1038/sj.emboj.7601511
Reference
  Authors
Luzio JP, Pryor PR, Bright NA
  Title
Lysosomes: fusion and function.
  Journal
Nat Rev Mol Cell Biol 8:622-32 (2007)
DOI:10.1038/nrm2217
Reference
  Authors
Sumimoto H
  Title
Structure, regulation and evolution of Nox-family NADPH oxidases that produce reactive oxygen species.
  Journal
FEBS J 275:3249-77 (2008)
DOI:10.1111/j.1742-4658.2008.06488.x
Related
pathway
cput04144  Endocytosis
KO pathway
ko04145   
LinkDB

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