KEGG   PATHWAY: fll00970
Entry
fll00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Flammeovirga pectinis
Class
Genetic Information Processing; Translation
Pathway map
fll00970  Aminoacyl-tRNA biosynthesis
fll00970

Organism
Flammeovirga pectinis [GN:fll]
Gene
EI427_13900  tRNA-Ala [KO:K14218]
EI427_14345  tRNA-Ala [KO:K14218]
EI427_17145  tRNA-Ala [KO:K14218]
EI427_18990  tRNA-Ala [KO:K14218]
EI427_19790  tRNA-Ala [KO:K14218]
EI427_20210  tRNA-Ala [KO:K14218]
EI427_22880  tRNA-Ala [KO:K14218]
EI427_23290  tRNA-Ala [KO:K14218]
EI427_18940  tRNA-Arg [KO:K14219]
EI427_18935  tRNA-Arg [KO:K14219]
EI427_09050  tRNA-Arg [KO:K14219]
EI427_09040  tRNA-Arg [KO:K14219]
EI427_09030  tRNA-Arg [KO:K14219]
EI427_01160  tRNA-Arg [KO:K14219]
EI427_14995  tRNA-Asn [KO:K14220]
EI427_15000  tRNA-Asn [KO:K14220]
EI427_12470  tRNA-Asp [KO:K14221]
EI427_12475  tRNA-Asp [KO:K14221]
EI427_12490  tRNA-Asp [KO:K14221]
EI427_12495  tRNA-Asp [KO:K14221]
EI427_12480  tRNA-Asp [KO:K14221]
EI427_12485  tRNA-Asp [KO:K14221]
EI427_12500  tRNA-Asp [KO:K14221]
EI427_13675  tRNA-Cys [KO:K14222]
EI427_16050  tRNA-Gln [KO:K14223]
EI427_16055  tRNA-Gln [KO:K14223]
EI427_20470  tRNA-Glu [KO:K14224]
EI427_20475  tRNA-Glu [KO:K14224]
EI427_20480  tRNA-Glu [KO:K14224]
EI427_20485  tRNA-Glu [KO:K14224]
EI427_20490  tRNA-Glu [KO:K14224]
EI427_20495  tRNA-Glu [KO:K14224]
EI427_20500  tRNA-Glu [KO:K14224]
EI427_03775  tRNA-Gly [KO:K14225]
EI427_14385  tRNA-Gly [KO:K14225]
EI427_14390  tRNA-Gly [KO:K14225]
EI427_18320  tRNA-Gly [KO:K14225]
EI427_18330  tRNA-Gly [KO:K14225]
EI427_18340  tRNA-Gly [KO:K14225]
EI427_06435  tRNA-His [KO:K14226]
EI427_02090  tRNA-His [KO:K14226]
EI427_06440  tRNA-His [KO:K14226]
EI427_18915  tRNA-Ile [KO:K14227]
EI427_19155  tRNA-Ile [KO:K14227]
EI427_15370  tRNA-Leu [KO:K14228]
EI427_18325  tRNA-Leu [KO:K14228]
EI427_07780  tRNA-Leu [KO:K14228]
EI427_07785  tRNA-Leu [KO:K14228]
EI427_07790  tRNA-Leu [KO:K14228]
EI427_07795  tRNA-Leu [KO:K14228]
EI427_14885  tRNA-Leu [KO:K14228]
EI427_18335  tRNA-Leu [KO:K14228]
EI427_14880  tRNA-Lys [KO:K14229]
EI427_14890  tRNA-Lys [KO:K14229]
EI427_14895  tRNA-Lys [KO:K14229]
EI427_14900  tRNA-Lys [KO:K14229]
EI427_14905  tRNA-Lys [KO:K14229]
EI427_14910  tRNA-Lys [KO:K14229]
EI427_07115  tRNA-Met [KO:K14230]
EI427_07615  tRNA-Met [KO:K14230]
EI427_18760  tRNA-Met [KO:K14230]
EI427_07630  tRNA-Met [KO:K14230]
EI427_07635  tRNA-Met [KO:K14230]
EI427_07640  tRNA-Met [KO:K14230]
EI427_20165  tRNA-Met [KO:K14230]
EI427_07620  tRNA-Met [KO:K14230]
EI427_07625  tRNA-Met [KO:K14230]
EI427_00060  tRNA-Phe [KO:K14231]
EI427_00055  tRNA-Phe [KO:K14231]
EI427_00065  tRNA-Phe [KO:K14231]
EI427_00070  tRNA-Phe [KO:K14231]
EI427_09035  tRNA-Pro [KO:K14232]
EI427_09055  tRNA-Pro [KO:K14232]
EI427_13200  tRNA-Pro [KO:K14232]
EI427_09045  tRNA-Pro [KO:K14232]
EI427_13195  tRNA-Ser [KO:K14233]
EI427_14695  tRNA-Ser [KO:K14233]
EI427_14810  tRNA-Ser [KO:K14233]
EI427_14690  tRNA-Ser [KO:K14233]
EI427_19080  tRNA-Thr [KO:K14234]
EI427_19090  tRNA-Thr [KO:K14234]
EI427_14365  tRNA-Thr [KO:K14234]
EI427_19085  tRNA-Thr [KO:K14234]
EI427_19095  tRNA-Thr [KO:K14234]
EI427_00995  tRNA-Trp [KO:K14235]
EI427_14410  tRNA-Trp [KO:K14235]
EI427_14370  tRNA-Tyr [KO:K14236]
EI427_14395  tRNA-Tyr [KO:K14236]
EI427_14400  tRNA-Tyr [KO:K14236]
EI427_09875  tRNA-Val [KO:K14237]
EI427_09880  tRNA-Val [KO:K14237]
EI427_09885  tRNA-Val [KO:K14237]
EI427_09890  tRNA-Val [KO:K14237]
EI427_09895  tRNA-Val [KO:K14237]
EI427_09900  tRNA-Val [KO:K14237]
EI427_09905  tRNA-Val [KO:K14237]
EI427_09910  tRNA-Val [KO:K14237]
EI427_19915  tRNA glutamyl-Q synthetase [KO:K01885] [EC:6.1.1.17]
EI427_04440  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
EI427_14640  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
EI427_13735  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
EI427_19990  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
EI427_04435  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
EI427_19565  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
EI427_19905  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
EI427_11685  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
EI427_14255  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
EI427_09920  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
EI427_14215  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
EI427_01790  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
EI427_18700  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
EI427_15640  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
EI427_10035  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
EI427_08365  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
EI427_09505  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
EI427_08570  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
EI427_04565  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
EI427_14190  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
EI427_06960  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
EI427_13685  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
EI427_02930  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
EI427_14630  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
EI427_07675  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
fll00250  Alanine, aspartate and glutamate metabolism
fll00260  Glycine, serine and threonine metabolism
fll00270  Cysteine and methionine metabolism
fll00290  Valine, leucine and isoleucine biosynthesis
fll00300  Lysine biosynthesis
fll00330  Arginine and proline metabolism
fll00340  Histidine metabolism
fll00380  Tryptophan metabolism
fll00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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