KEGG   PATHWAY: manc00970
Entry
manc00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Massilia antarctica
Class
Genetic Information Processing; Translation
Pathway map
manc00970  Aminoacyl-tRNA biosynthesis
manc00970

Organism
Massilia antarctica [GN:manc]
Gene
IV454_05925  tRNA-Ala [KO:K14218]
IV454_05960  tRNA-Ala [KO:K14218]
IV454_06015  tRNA-Ala [KO:K14218]
IV454_12290  tRNA-Ala [KO:K14218]
IV454_12405  tRNA-Ala [KO:K14218]
IV454_12560  tRNA-Ala [KO:K14218]
IV454_18155  tRNA-Ala [KO:K14218]
IV454_18170  tRNA-Ala [KO:K14218]
IV454_21405  tRNA-Arg [KO:K14219]
IV454_25640  tRNA-Arg [KO:K14219]
IV454_25645  tRNA-Arg [KO:K14219]
IV454_25650  tRNA-Arg [KO:K14219]
IV454_05135  tRNA-Arg [KO:K14219]
IV454_08695  tRNA-Arg [KO:K14219]
IV454_16890  tRNA-Arg [KO:K14219]
IV454_20025  tRNA-Arg [KO:K14219]
IV454_31100  tRNA-Asn [KO:K14220]
IV454_31110  tRNA-Asn [KO:K14220]
IV454_31120  tRNA-Asn [KO:K14220]
IV454_06640  tRNA-Asp [KO:K14221]
IV454_24655  tRNA-Asp [KO:K14221]
IV454_24660  tRNA-Asp [KO:K14221]
IV454_24665  tRNA-Asp [KO:K14221]
IV454_06335  tRNA-Cys [KO:K14222]
IV454_18540  tRNA-Cys [KO:K14222]
IV454_10700  tRNA-Gln [KO:K14223]
IV454_18160  tRNA-Glu [KO:K14224]
IV454_18165  tRNA-Glu [KO:K14224]
IV454_18175  tRNA-Glu [KO:K14224]
IV454_18520  tRNA-Gly [KO:K14225]
IV454_18525  tRNA-Gly [KO:K14225]
IV454_18530  tRNA-Gly [KO:K14225]
IV454_18535  tRNA-Gly [KO:K14225]
IV454_05110  tRNA-Gly [KO:K14225]
IV454_09815  tRNA-Gly [KO:K14225]
IV454_15175  tRNA-His [KO:K14226]
IV454_08765  tRNA-His [KO:K14226]
IV454_08745  tRNA-His [KO:K14226]
IV454_05930  tRNA-Ile [KO:K14227]
IV454_05965  tRNA-Ile [KO:K14227]
IV454_06020  tRNA-Ile [KO:K14227]
IV454_12285  tRNA-Ile [KO:K14227]
IV454_12400  tRNA-Ile [KO:K14227]
IV454_12555  tRNA-Ile [KO:K14227]
IV454_30685  tRNA-Leu [KO:K14228]
IV454_20650  tRNA-Leu [KO:K14228]
IV454_20655  tRNA-Leu [KO:K14228]
IV454_20660  tRNA-Leu [KO:K14228]
IV454_24700  tRNA-Leu [KO:K14228]
IV454_04025  tRNA-Leu [KO:K14228]
IV454_21845  tRNA-Leu [KO:K14228]
IV454_08755  tRNA-Leu [KO:K14228]
IV454_01405  tRNA-Lys [KO:K14229]
IV454_01410  tRNA-Lys [KO:K14229]
IV454_30175  tRNA-Lys [KO:K14229]
IV454_01190  tRNA-Met [KO:K14230]
IV454_18220  tRNA-Met [KO:K14230]
IV454_02615  tRNA-Ile [KO:K14230]
IV454_02850  tRNA-Met [KO:K14230]
IV454_12125  tRNA-Phe [KO:K14231]
IV454_12130  tRNA-Phe [KO:K14231]
IV454_14545  tRNA-Pro [KO:K14232]
IV454_31700  tRNA-Pro [KO:K14232]
IV454_07360  tRNA-Pro [KO:K14232]
IV454_20020  tRNA-Pro [KO:K14232]
IV454_21690  tRNA-Pro [KO:K14232]
IV454_15200  tRNA-Ser [KO:K14233]
IV454_29920  tRNA-Ser [KO:K14233]
IV454_20775  tRNA-Ser [KO:K14233]
IV454_20780  tRNA-Ser [KO:K14233]
IV454_28750  tRNA-Ser [KO:K14233]
IV454_28755  tRNA-Ser [KO:K14233]
IV454_02160  tRNA-Thr [KO:K14234]
IV454_08310  tRNA-Thr [KO:K14234]
IV454_09335  tRNA-Thr [KO:K14234]
IV454_09820  tRNA-Thr [KO:K14234]
IV454_09830  tRNA-Trp [KO:K14235]
IV454_08740  tRNA-Trp [KO:K14235]
IV454_08770  tRNA-Tyr [KO:K14236]
IV454_09810  tRNA-Tyr [KO:K14236]
IV454_06635  tRNA-Val [KO:K14237]
IV454_24670  tRNA-Val [KO:K14237]
IV454_22890  tRNA-Val [KO:K14237]
IV454_27065  tRNA-Val [KO:K14237]
IV454_27070  tRNA-Val [KO:K14237]
IV454_18150  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
IV454_12855  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
IV454_12850  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
IV454_12860  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
IV454_15630  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
IV454_15795  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
IV454_11150  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
IV454_02980  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
IV454_02985  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
IV454_27060  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
IV454_28760  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
IV454_20750  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
IV454_18080  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
IV454_24135  class I tRNA ligase family protein [KO:K01874] [EC:6.1.1.10]
IV454_12985  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
IV454_13290  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
IV454_05230  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
IV454_01135  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
IV454_23740  class I tRNA ligase family protein [KO:K01870] [EC:6.1.1.5]
IV454_22450  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
IV454_12925  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
IV454_03345  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
IV454_31200  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
IV454_27040  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
IV454_27035  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
IV454_13175  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
IV454_32480  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
IV454_00110  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
IV454_02515  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
manc00250  Alanine, aspartate and glutamate metabolism
manc00260  Glycine, serine and threonine metabolism
manc00270  Cysteine and methionine metabolism
manc00290  Valine, leucine and isoleucine biosynthesis
manc00300  Lysine biosynthesis
manc00330  Arginine and proline metabolism
manc00340  Histidine metabolism
manc00380  Tryptophan metabolism
manc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

DBGET integrated database retrieval system