KEGG   PATHWAY: medk00970
Entry
medk00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Methylocapsa sp. D3K7
Class
Genetic Information Processing; Translation
Pathway map
medk00970  Aminoacyl-tRNA biosynthesis
medk00970

Organism
Methylocapsa sp. D3K7 [GN:medk]
Gene
QEV83_02845  tRNA-Ala [KO:K14218]
QEV83_06620  tRNA-Ala [KO:K14218]
QEV83_11465  tRNA-Ala [KO:K14218]
QEV83_00925  tRNA-Arg [KO:K14219]
QEV83_04320  tRNA-Arg [KO:K14219]
QEV83_05445  tRNA-Arg [KO:K14219]
QEV83_09465  tRNA-Arg [KO:K14219]
QEV83_18410  tRNA-Arg [KO:K14219]
QEV83_03860  tRNA-Asn [KO:K14220]
QEV83_01455  tRNA-Asp [KO:K14221]
QEV83_03865  tRNA-Cys [KO:K14222]
QEV83_01240  tRNA-Gln [KO:K14223]
QEV83_08640  tRNA-Gln [KO:K14223]
QEV83_17235  tRNA-Glu [KO:K14224]
QEV83_16875  tRNA-Glu [KO:K14224]
QEV83_19370  tRNA-Gly [KO:K14225]
QEV83_03535  tRNA-Gly [KO:K14225]
QEV83_08295  tRNA-Gly [KO:K14225]
QEV83_04945  tRNA-His [KO:K14226]
QEV83_11470  tRNA-Ile [KO:K14227]
QEV83_13415  tRNA-Leu [KO:K14228]
QEV83_04395  tRNA-Leu [KO:K14228]
QEV83_03480  tRNA-Leu [KO:K14228]
QEV83_14975  tRNA-Leu [KO:K14228]
QEV83_00680  tRNA-Leu [KO:K14228]
QEV83_03650  tRNA-Lys [KO:K14229]
QEV83_17695  tRNA-Lys [KO:K14229]
QEV83_10290  tRNA-Met [KO:K14230]
QEV83_07755  tRNA-Ile [KO:K14230]
QEV83_11450  tRNA-Met [KO:K14230]
QEV83_14610  tRNA-Phe [KO:K14231]
QEV83_00775  tRNA-Pro [KO:K14232]
QEV83_05675  tRNA-Pro [KO:K14232]
QEV83_07010  tRNA-Pro [KO:K14232]
QEV83_00575  tRNA-Ser [KO:K14233]
QEV83_02205  tRNA-Ser [KO:K14233]
QEV83_02550  tRNA-Ser [KO:K14233]
QEV83_06205  tRNA-Ser [KO:K14233]
QEV83_05705  tRNA-Thr [KO:K14234]
QEV83_04290  tRNA-Thr [KO:K14234]
QEV83_13545  tRNA-Thr [KO:K14234]
QEV83_02460  tRNA-Trp [KO:K14235]
QEV83_15595  tRNA-Tyr [KO:K14236]
QEV83_01625  tRNA-Val [KO:K14237]
QEV83_13985  tRNA-Val [KO:K14237]
QEV83_19125  tRNA-Val [KO:K14237]
QEV83_12000  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
QEV83_18595  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
QEV83_12745  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
QEV83_14215  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
QEV83_12740  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
QEV83_02690  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
QEV83_14275  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
QEV83_05875  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
QEV83_05860  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
QEV83_15465  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
QEV83_16655  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
QEV83_09745  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
QEV83_00885  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
QEV83_16010  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
QEV83_07075  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
QEV83_12405  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
QEV83_18490  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
QEV83_07610  lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
QEV83_16620  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
QEV83_16535  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
QEV83_00445  HisS family protein [KO:K01892] [EC:6.1.1.21]
QEV83_01310  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
QEV83_18935  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
QEV83_16595  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
QEV83_12255  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
medk00250  Alanine, aspartate and glutamate metabolism
medk00260  Glycine, serine and threonine metabolism
medk00270  Cysteine and methionine metabolism
medk00290  Valine, leucine and isoleucine biosynthesis
medk00300  Lysine biosynthesis
medk00330  Arginine and proline metabolism
medk00340  Histidine metabolism
medk00380  Tryptophan metabolism
medk00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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