KEGG   PATHWAY: mgi00630
Entry
mgi00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mycolicibacterium gilvum PYR-GCK
Class
Metabolism; Carbohydrate metabolism
Pathway map
mgi00630  Glyoxylate and dicarboxylate metabolism
mgi00630

Module
mgi_M00012  Glyoxylate cycle [PATH:mgi00630]
mgi_M00621  Glycine cleavage system [PATH:mgi00630]
mgi_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mgi00630]
Other DBs
GO: 0046487 0043648
Organism
Mycolicibacterium gilvum PYR-GCK [GN:mgi]
Gene
Mflv_3260  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Mflv_0107  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Mflv_1380  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Mflv_4866  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Mflv_4983  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
Mflv_3367  malate synthase G [KO:K01638] [EC:2.3.3.9]
Mflv_3339  malate dehydrogenase (NAD) [KO:K00024] [EC:1.1.1.37]
Mflv_1726  citrate synthase [KO:K01647] [EC:2.3.3.1]
Mflv_1729  citrate synthase [KO:K01647] [EC:2.3.3.1]
Mflv_3665  aconitase [KO:K01681] [EC:4.2.1.3]
Mflv_1347  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_1484  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_4625  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_4368  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_2340  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_2040  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_1691  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_3340  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_1808  thiolase [KO:K00626] [EC:2.3.1.9]
Mflv_1869  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_1536  acetyl-CoA acyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_1507  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_0411  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Mflv_2505  Thiolase [KO:K00626] [EC:2.3.1.9]
Mflv_2339  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Mflv_4784  biotin carboxylase / biotin carboxyl carrier protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Mflv_4774  carboxyl transferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
Mflv_4775  conserved hypothetical protein [KO:K27095]
Mflv_2775  Propionyl-CoA carboxylase [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Mflv_3649  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
Mflv_3650  methylmalonyl-CoA mutase, beta subunit [KO:K01847] [EC:5.4.99.2]
Mflv_2388  cobalamin B12-binding domain protein [KO:K01849] [EC:5.4.99.2]
Mflv_2387  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
Mflv_2230  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
Mflv_3446  Catalase [KO:K03781] [EC:1.11.1.6]
Mflv_1308  Catalase [KO:K03781] [EC:1.11.1.6]
Mflv_2889  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K01091] [EC:3.1.3.18]
Mflv_4065  Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Mflv_3319  glutamine synthetase, catalytic region [KO:K01915] [EC:6.3.1.2]
Mflv_2596  glutamine synthetase, catalytic region [KO:K01915] [EC:6.3.1.2]
Mflv_2909  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Mflv_2928  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Mflv_1300  Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Mflv_2060  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Mflv_3398  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Mflv_2939  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Mflv_5134  Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Mflv_0114  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Mflv_3403  glycine cleavage system H protein [KO:K02437]
Mflv_2604  Xylose isomerase domain protein TIM barrel [KO:K01816] [EC:5.3.1.22]
Mflv_2944  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
Mflv_2218  2-oxoglutarate dehydrogenase E1 component [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
Mflv_4437  Cupin domain protein [KO:K01569] [EC:4.1.1.2]
Mflv_2249  Formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
Mflv_5090  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mgi00010  Glycolysis / Gluconeogenesis
mgi00020  Citrate cycle (TCA cycle)
mgi00030  Pentose phosphate pathway
mgi00053  Ascorbate and aldarate metabolism
mgi00071  Fatty acid degradation
mgi00230  Purine metabolism
mgi00250  Alanine, aspartate and glutamate metabolism
mgi00260  Glycine, serine and threonine metabolism
mgi00620  Pyruvate metabolism
mgi00710  Carbon fixation by Calvin cycle
mgi00750  Vitamin B6 metabolism
mgi00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system