KEGG   PATHWAY: mlo00630
Entry
mlo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mesorhizobium japonicum MAFF 303099
Class
Metabolism; Carbohydrate metabolism
Pathway map
mlo00630  Glyoxylate and dicarboxylate metabolism
mlo00630

Module
mlo_M00012  Glyoxylate cycle [PATH:mlo00630]
mlo_M00621  Glycine cleavage system [PATH:mlo00630]
mlo_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mlo00630]
Other DBs
GO: 0046487 0043648
Organism
Mesorhizobium japonicum MAFF 303099 [GN:mlo]
Gene
mll6527  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
mll6017  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
mlr4089  acetyl-CoA synthase [KO:K01895] [EC:6.2.1.1]
mlr2005  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
mlr4664  malate synthase G [KO:K01638] [EC:2.3.3.9]
mll4308  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
mll3842  citrate synthase; CitZ [KO:K01647] [EC:2.3.3.1]
mlr0629  citrate synthase [KO:K01647] [EC:2.3.3.1]
mlr3843  citrate synthase II [KO:K01647] [EC:2.3.3.1]
mlr4335  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
mlr1326  succinyl-CoA synthetase alpha subunit [KO:K08692] [EC:6.2.1.9]
mlr1324  succinyl-CoA synthetase beta subunit [KO:K14067] [EC:6.2.1.9]
mlr3847  beta-ketothiolase; acetoacetyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
mlr5628  probable acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
mlr7614  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
mlr3848  beta-ketothiolase; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
mll1346  hypothetical protein [KO:K05606] [EC:5.1.99.1]
mll0871  propionyl-CoA carboxylase alpha chain precursor [KO:K01965] [EC:6.4.1.3]
mll0348  propionyl-CoA carboxylase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
mll7619  methylmalonyl-CoA large subunit [KO:K01847] [EC:5.4.99.2]
mll7621  methylmalonyl-CoA small subunit [KO:K01847] [EC:5.4.99.2]
mlr6095  3-methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
mlr6916  glycolate oxidase subunit; GlcD [KO:K00104] [EC:1.1.99.14]
mlr6919  glycolate oxidase subunits; GlcE [KO:K11472] [EC:1.1.99.14]
mlr6920  glycolate oxidase subunit [KO:K11473] [EC:1.1.99.14]
mlr2101  catalase [KO:K03781] [EC:1.11.1.6]
mlr5574  probable dehydrogenase [KO:K00015] [EC:1.1.1.26]
mll7048  probable dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
mll5489  putative 2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
mlr5413  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
mlr0528  probable phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
mlr1322  probable serine-glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
mlr6210  glutamine synthetase III [KO:K01915] [EC:6.3.1.2]
mll6521  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
mll7254  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
mll7307  glutamine synthetase III [KO:K01915] [EC:6.3.1.2]
mll5148  probable glutamine synthetase [KO:K01915] [EC:6.3.1.2]
mll3074  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
mll4187  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
mll0343  glutamine synthetase I [KO:K01915] [EC:6.3.1.2]
mlr0339  glutamine synthetase II [KO:K01915] [EC:6.3.1.2]
mlr6114  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
mlr8400  glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
mlr0885  glycine cleavage system protein P [KO:K00281] [EC:1.4.4.2]
mlr4790  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
mll7302  similar to aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
mlr7320  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
mlr3677  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
mlr0883  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
mll4296  ferric leghemoglobin reductase-2 precursor, dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
mll4470  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
mlr0388  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
mlr0884  glycine cleavage system protein H [KO:K02437]
mlr0251  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
mlr0252  hypothetical protein [KO:K01816] [EC:5.3.1.22]
mll1001  hypothetical protein [KO:K01816] [EC:5.3.1.22]
mlr7629  hypothetical protein [KO:K01816] [EC:5.3.1.22]
mlr0254  probable oxidoreductase [KO:K00042] [EC:1.1.1.60]
mlr5146  hypothetical protein [KO:K11529] [EC:2.7.1.165]
mll7044  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
mlr2994  2-keto-3-deoxy-6-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
mll5393  NAD-dependent formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
mll5396  NAD-dependent formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
mll5397  NAD-dependent formate dehydrogenase beta subunit [KO:K00124]
mll5398  NAD-dependent formate dehydrogenase gamma subunit [KO:K00127]
mll5717  hypothetical protein [KO:K01432] [EC:3.5.1.9]
mlr8322  N-formylglutamate amidohydrolase; HutG [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mlo00010  Glycolysis / Gluconeogenesis
mlo00020  Citrate cycle (TCA cycle)
mlo00030  Pentose phosphate pathway
mlo00053  Ascorbate and aldarate metabolism
mlo00071  Fatty acid degradation
mlo00230  Purine metabolism
mlo00250  Alanine, aspartate and glutamate metabolism
mlo00260  Glycine, serine and threonine metabolism
mlo00620  Pyruvate metabolism
mlo00710  Carbon fixation by Calvin cycle
mlo00750  Vitamin B6 metabolism
mlo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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