Entry
Name
NOD-like receptor signaling pathway - Oncorhynchus nerka (sockeye salmon)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
one04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Oncorhynchus nerka (sockeye salmon) [GN:
one ]
Gene
115102436 nucleotide-binding oligomerization domain-containing protein 1-like [KO:K08727 ]
115102442 nucleotide-binding oligomerization domain-containing protein 1-like [KO:K08727 ]
115140905 nucleotide-binding oligomerization domain-containing protein 1-like isoform X1 [KO:K08727 ]
115129372 nuclear factor NF-kappa-B p105 subunit-like isoform X1 [KO:K02580 ]
115116194 nucleotide-binding oligomerization domain-containing protein 2-like [KO:K10165 ]
115116231 nucleotide-binding oligomerization domain-containing protein 2-like [KO:K10165 ]
115107680 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1 [KO:K04404 ]
115139492 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1 [KO:K04404 ]
115108080 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 [KO:K12793 ]
115109054 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like [KO:K12793 ]
115135424 gamma-aminobutyric acid receptor-associated protein-like isoform X1 [KO:K08341 ]
115138144 gamma-aminobutyric acid receptor-associated protein-like [KO:K08341 ]
115101198 gamma-aminobutyric acid receptor-associated protein-like 1 isoform X1 [KO:K08341 ]
115109316 gabarapl2; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
115140802 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
115142635 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
115131208 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
115134394 microtubule-associated proteins 1A/1B light chain 3B-like [KO:K10435 ]
115103574 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
115114861 ranBP-type and C3HC4-type zinc finger-containing protein 1-like [KO:K20894 ]
115102982 ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1 [KO:K20894 ]
115133539 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
115133540 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
115133542 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
115133543 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
115111322 caspase recruitment domain-containing protein 9-like isoform X1 [KO:K12794 ]
115139751 caspase recruitment domain-containing protein 9-like isoform X1 [KO:K12794 ]
115143581 LOW QUALITY PROTEIN: TRAF family member-associated NF-kappa-B activator-like [KO:K12650 ]
115108525 TRAF family member-associated NF-kappa-B activator-like [KO:K12650 ]
115142061 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
115114718 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
115124851 LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 7-like [KO:K04982 ] [EC:2.7.11.1 ]
115142183 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
115113996 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
115102369 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
115146525 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
115138594 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
115133302 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
115146133 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
115143109 itpr1; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
115143394 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
115137202 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
115140382 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
115134115 inositol 1,4,5-trisphosphate receptor type 2-like isoform X1 [KO:K04959 ]
115109547 inositol 1,4,5-trisphosphate receptor type 2-like isoform X1 [KO:K04959 ]
115132159 itpr3; inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
115117655 LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor type 3-like [KO:K04960 ]
115105281 voltage-dependent anion-selective channel protein 1-like [KO:K05862 ]
115112956 voltage-dependent anion-selective channel protein 2-like [KO:K15040 ]
115113103 voltage-dependent anion-selective channel protein 2-like [KO:K15040 ]
115134971 voltage-dependent anion-selective channel protein 2-like [KO:K15040 ]
115111724 voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
115105911 voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
115126239 voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
115140183 voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
115135664 lys-63-specific deubiquitinase BRCC36-like [KO:K11864 ] [EC:3.4.19.-]
115101302 lys-63-specific deubiquitinase BRCC36 isoform X1 [KO:K11864 ] [EC:3.4.19.-]
115120518 proline-serine-threonine phosphatase-interacting protein 1-like isoform X1 [KO:K12804 ]
115112777 proline-serine-threonine phosphatase-interacting protein 1-like [KO:K12804 ]
115109419 proline-serine-threonine phosphatase-interacting protein 1-like isoform X1 [KO:K12804 ]
115134241 proline-serine-threonine phosphatase-interacting protein 1-like isoform X1 [KO:K12804 ]
115129673 signal transducer and activator of transcription 1-alpha/beta-like isoform X1 [KO:K11220 ]
115138513 signal transducer and activator of transcription 1-alpha/beta-like [KO:K11220 ]
115108041 signal transducer and activator of transcription 1-alpha/beta-like isoform X1 [KO:K11220 ]
115133971 signal transducer and activator of transcription 1-alpha/beta-like isoform X1 [KO:K11220 ]
115133986 signal transducer and activator of transcription 1-alpha/beta-like [KO:K11220 ]
115143174 signal transducer and activator of transcription 1-alpha/beta-like isoform X1 [KO:K11221 ]
115126380 myd88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
one04620 Toll-like receptor signaling pathway
KO pathway
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