KEGG   PATHWAY: orp00970
Entry
orp00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Occallatibacter riparius
Class
Genetic Information Processing; Translation
Pathway map
orp00970  Aminoacyl-tRNA biosynthesis
orp00970

Organism
Occallatibacter riparius [GN:orp]
Gene
MOP44_27015  tRNA-Ala [KO:K14218]
MOP44_15090  tRNA-Arg [KO:K14219]
MOP44_23265  tRNA-Arg [KO:K14219]
MOP44_03950  tRNA-Glu [KO:K14224]
MOP44_05460  tRNA-Gly [KO:K14225]
MOP44_27020  tRNA-Ile [KO:K14227]
MOP44_27345  tRNA-Leu [KO:K14228]
MOP44_07705  tRNA-Met [KO:K14230]
MOP44_01130  tRNA-Pro [KO:K14232]
MOP44_01490  tRNA-Thr [KO:K14234]
MOP44_18015  tRNA-Val [KO:K14237]
MOP44_03720  glutamate--tRNA ligase family protein [KO:K01885] [EC:6.1.1.17]
MOP44_09800  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
MOP44_10675  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
MOP44_09795  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
MOP44_11835  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
MOP44_06625  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
MOP44_03745  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
MOP44_04550  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
MOP44_08490  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
MOP44_20145  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
MOP44_07675  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
MOP44_15435  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
MOP44_24605  selA; L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
MOP44_06005  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
MOP44_12350  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
MOP44_12445  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
MOP44_22115  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
MOP44_18080  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
MOP44_21880  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
MOP44_11890  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
MOP44_03740  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
MOP44_11135  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
MOP44_07050  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
MOP44_08505  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
orp00250  Alanine, aspartate and glutamate metabolism
orp00260  Glycine, serine and threonine metabolism
orp00270  Cysteine and methionine metabolism
orp00290  Valine, leucine and isoleucine biosynthesis
orp00300  Lysine biosynthesis
orp00330  Arginine and proline metabolism
orp00340  Histidine metabolism
orp00380  Tryptophan metabolism
orp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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