KEGG   PATHWAY: pand00970
Entry
pand00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pandoraea sp. XY-2
Class
Genetic Information Processing; Translation
Pathway map
pand00970  Aminoacyl-tRNA biosynthesis
pand00970

Organism
Pandoraea sp. XY-2 [GN:pand]
Gene
DRB87_13715  tRNA-Ala [KO:K14218]
DRB87_22010  tRNA-Ala [KO:K14218]
DRB87_16115  tRNA-Ala [KO:K14218]
DRB87_20815  tRNA-Ala [KO:K14218]
DRB87_04575  tRNA-Ala [KO:K14218]
DRB87_16845  tRNA-Ala [KO:K14218]
DRB87_20210  tRNA-Ala [KO:K14218]
DRB87_21605  tRNA-Ala [KO:K14218]
DRB87_17230  tRNA-Arg [KO:K14219]
DRB87_22280  tRNA-Arg [KO:K14219]
DRB87_14990  tRNA-Arg [KO:K14219]
DRB87_16260  tRNA-Arg [KO:K14219]
DRB87_16265  tRNA-Arg [KO:K14219]
DRB87_18870  tRNA-Asn [KO:K14220]
DRB87_18865  tRNA-Asn [KO:K14220]
DRB87_12755  tRNA-Asp [KO:K14221]
DRB87_13700  tRNA-Asp [KO:K14221]
DRB87_13705  tRNA-Asp [KO:K14221]
DRB87_18625  tRNA-Cys [KO:K14222]
DRB87_02725  tRNA-Gln [KO:K14223]
DRB87_13710  tRNA-Glu [KO:K14224]
DRB87_16110  tRNA-Glu [KO:K14224]
DRB87_20810  tRNA-Glu [KO:K14224]
DRB87_18630  tRNA-Gly [KO:K14225]
DRB87_18635  tRNA-Gly [KO:K14225]
DRB87_19190  tRNA-Gly [KO:K14225]
DRB87_21580  tRNA-Gly [KO:K14225]
DRB87_09275  tRNA-His [KO:K14226]
DRB87_04570  tRNA-Ile [KO:K14227]
DRB87_16850  tRNA-Ile [KO:K14227]
DRB87_20215  tRNA-Ile [KO:K14227]
DRB87_21610  tRNA-Ile [KO:K14227]
DRB87_09540  tRNA-Leu [KO:K14228]
DRB87_18460  tRNA-Leu [KO:K14228]
DRB87_12980  tRNA-Leu [KO:K14228]
DRB87_00355  tRNA-Leu [KO:K14228]
DRB87_08455  tRNA-Leu [KO:K14228]
DRB87_05485  tRNA-Leu [KO:K14228]
DRB87_09550  tRNA-Leu [KO:K14228]
DRB87_07545  tRNA-Lys [KO:K14229]
DRB87_09410  tRNA-Lys [KO:K14229]
DRB87_09415  tRNA-Lys [KO:K14229]
DRB87_09420  tRNA-Lys [KO:K14229]
DRB87_09260  tRNA-Met [KO:K14230]
DRB87_14820  tRNA-Met [KO:K14230]
DRB87_16880  tRNA-Met [KO:K14230]
DRB87_19420  tRNA-Met [KO:K14230]
DRB87_00950  tRNA-Phe [KO:K14231]
DRB87_13350  tRNA-Pro [KO:K14232]
DRB87_20015  tRNA-Pro [KO:K14232]
DRB87_15085  tRNA-Pro [KO:K14232]
DRB87_04475  tRNA-Ser [KO:K14233]
DRB87_14000  tRNA-Ser [KO:K14233]
DRB87_08865  tRNA-Ser [KO:K14233]
DRB87_06115  tRNA-Ser [KO:K14233]
DRB87_15675  tRNA-Thr [KO:K14234]
DRB87_20935  tRNA-Thr [KO:K14234]
DRB87_21575  tRNA-Thr [KO:K14234]
DRB87_21565  tRNA-Trp [KO:K14235]
DRB87_21585  tRNA-Tyr [KO:K14236]
DRB87_12760  tRNA-Val [KO:K14237]
DRB87_01830  tRNA-Val [KO:K14237]
DRB87_13565  tRNA-Val [KO:K14237]
DRB87_15370  tRNA-Val [KO:K14237]
DRB87_07225  tRNA-Sec [KO:K14238]
DRB87_08800  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
DRB87_01020  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DRB87_14355  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DRB87_15580  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DRB87_01015  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DRB87_07990  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
DRB87_14980  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
DRB87_03945  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
DRB87_19595  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
DRB87_19600  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
DRB87_13560  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
DRB87_06110  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
DRB87_00225  selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
DRB87_07215  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
DRB87_08840  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
DRB87_19195  glycoside hydrolase [KO:K01884] [EC:6.1.1.16]
DRB87_05945  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
DRB87_09905  formyltransferase [KO:K00604] [EC:2.1.2.9]
DRB87_00920  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
DRB87_14935  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
DRB87_17805  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
DRB87_08265  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
DRB87_19970  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
DRB87_09080  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
DRB87_13540  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
DRB87_04080  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
DRB87_08375  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
DRB87_22835  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
pand00250  Alanine, aspartate and glutamate metabolism
pand00260  Glycine, serine and threonine metabolism
pand00270  Cysteine and methionine metabolism
pand00290  Valine, leucine and isoleucine biosynthesis
pand00300  Lysine biosynthesis
pand00330  Arginine and proline metabolism
pand00340  Histidine metabolism
pand00380  Tryptophan metabolism
pand00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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