KEGG   PATHWAY: pbx04145
Entry
pbx04145                    Pathway                                
Name
Phagosome - Pieris brassicae (large cabbage white)
Description
Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
Class
Cellular Processes; Transport and catabolism
Pathway map
pbx04145  Phagosome
pbx04145

Other DBs
GO: 0045335
Organism
Pieris brassicae (large cabbage white) [GN:pbx]
Gene
123718386  syntaxin-7 [KO:K13813]
123715420  actin, cytoplasmic A3a [KO:K05692]
123715440  actin-5C [KO:K05692]
123706877  syntaxin-18 [KO:K08492]
123714284  vesicle-trafficking protein SEC22b [KO:K08517]
123709121  ras-related protein Rab-5B [KO:K07888]
123707796  phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X1 [KO:K00914] [EC:2.7.1.137]
123707982  hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182]
123714390  V-type proton ATPase catalytic subunit A [KO:K02145] [EC:7.1.2.2]
123720029  V-type proton ATPase subunit B [KO:K02147]
123710978  V-type proton ATPase subunit C [KO:K02148]
123714572  V-type proton ATPase subunit D [KO:K02149]
123707598  V-type proton ATPase subunit D-like [KO:K02149]
123710198  V-type proton ATPase subunit E [KO:K02150]
123711152  V-type proton ATPase subunit F [KO:K02151]
123714556  V-type proton ATPase subunit G [KO:K02152]
123718080  V-type proton ATPase subunit e 2-like [KO:K02153]
123707949  V-type proton ATPase 116 kDa subunit a1 [KO:K02154]
123710656  V-type proton ATPase 116 kDa subunit a1-like [KO:K02154]
123710886  V-type proton ATPase 116 kDa subunit a1 isoform X1 [KO:K02154]
123718537  V-type proton ATPase 116 kDa subunit a1-like [KO:K02154]
123712603  V-type proton ATPase subunit d [KO:K02146]
123712832  V-type proton ATPase subunit H isoform X1 [KO:K02144]
123711060  V-type proton ATPase 16 kDa proteolipid subunit [KO:K02155]
123714560  V-type proton ATPase 21 kDa proteolipid subunit [KO:K03661]
123707544  ras-related protein Rab-7a [KO:K07897]
123706896  dynein heavy chain, cytoplasmic isoform X1 [KO:K10413]
123714875  cytoplasmic dynein 2 heavy chain 1 [KO:K10414]
123708384  cytoplasmic dynein 1 intermediate chain isoform X1 [KO:K10415]
123708223  cytoplasmic dynein 1 light intermediate chain 2 [KO:K10416]
123711777  tubulin alpha-8 chain-like isoform X1 [KO:K07374]
123713592  tubulin alpha chain-like isoform X1 [KO:K07374]
123715130  tubulin alpha chain [KO:K07374]
123716027  tubulin alpha chain [KO:K07374]
123718715  tubulin alpha-1 chain-like [KO:K07374]
123707051  tubulin beta-1 chain [KO:K07375]
123707683  tubulin beta-1 chain-like [KO:K07375]
123707836  tubulin beta chain-like [KO:K07375]
123708370  tubulin beta chain-like [KO:K07375]
123708371  tubulin beta-4B chain-like [KO:K07375]
123708372  tubulin beta-4B chain-like [KO:K07375]
123714901  tubulin beta chain-like [KO:K07375]
123714940  tubulin beta chain-like [KO:K07375]
123715791  tubulin beta chain [KO:K07375]
123708272  nitric oxide synthase-like isoform X1 [KO:K13240] [EC:1.14.13.39]
123708858  nitric oxide synthase-like protein isoform X1 [KO:K13240] [EC:1.14.13.39]
123720857  cathepsin L isoform X1 [KO:K01365] [EC:3.4.22.15]
123714419  protein transport protein Sec61 subunit alpha [KO:K10956]
123711862  protein transport protein Sec61 subunit beta [KO:K09481]
123711497  protein transport protein Sec61 subunit gamma [KO:K07342]
123714146  calreticulin [KO:K08057]
123712351  calnexin isoform X1 [KO:K08054]
123710723  integrin beta-PS [KO:K05719]
123712796  cartilage oligomeric matrix protein [KO:K04659]
123708194  ras-related protein Rac1 [KO:K04392]
123708647  ras-related C3 botulinum toxin substrate 1 [KO:K04392]
123717683  ras-like GTP-binding protein RhoL [KO:K04392]
Compound
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
Reference
  Authors
Stuart LM, Ezekowitz RA
  Title
Phagocytosis: elegant complexity.
  Journal
Immunity 22:539-50 (2005)
DOI:10.1016/j.immuni.2005.05.002
Reference
  Authors
Tjelle TE, Lovdal T, Berg T
  Title
Phagosome dynamics and function.
  Journal
Reference
  Authors
Dupuy AG, Caron E
  Title
Integrin-dependent phagocytosis: spreading from microadhesion to new concepts.
  Journal
J Cell Sci 121:1773-83 (2008)
DOI:10.1242/jcs.018036
Reference
  Authors
Brumell JH, Grinstein S
  Title
Salmonella redirects phagosomal maturation.
  Journal
Curr Opin Microbiol 7:78-84 (2004)
DOI:10.1016/j.mib.2003.12.005
Reference
  Authors
Huynh KK, Eskelinen EL, Scott CC, Malevanets A, Saftig P, Grinstein S
  Title
LAMP proteins are required for fusion of lysosomes with phagosomes.
  Journal
EMBO J 26:313-24 (2007)
DOI:10.1038/sj.emboj.7601511
Reference
  Authors
Luzio JP, Pryor PR, Bright NA
  Title
Lysosomes: fusion and function.
  Journal
Nat Rev Mol Cell Biol 8:622-32 (2007)
DOI:10.1038/nrm2217
Reference
  Authors
Sumimoto H
  Title
Structure, regulation and evolution of Nox-family NADPH oxidases that produce reactive oxygen species.
  Journal
FEBS J 275:3249-77 (2008)
DOI:10.1111/j.1742-4658.2008.06488.x
Related
pathway
pbx04142  Lysosome
pbx04144  Endocytosis
KO pathway
ko04145   
LinkDB

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