KEGG   PATHWAY: pnt03440
Entry
pnt03440                    Pathway                                
Name
Homologous recombination - Pseudomonas nitroreducens
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
pnt03440  Homologous recombination
pnt03440

Other DBs
GO: 0000724
Organism
Pseudomonas nitroreducens [GN:pnt]
Gene
G5B91_08770  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
G5B91_03615  ssb; single-stranded DNA-binding protein [KO:K03111]
G5B91_07300  single-stranded DNA-binding protein [KO:K03111]
G5B91_10830  ssb; single-stranded DNA-binding protein [KO:K03111]
G5B91_20805  single-stranded DNA-binding protein [KO:K03111]
G5B91_00015  recF; DNA replication/repair protein RecF [KO:K03629]
G5B91_08040  recO; DNA repair protein RecO [KO:K03584]
G5B91_20465  recR; recombination protein RecR [KO:K06187]
G5B91_09500  recA; recombinase RecA [KO:K03553]
G5B91_33515  recA; recombinase RecA [KO:K03553]
G5B91_01065  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
G5B91_24500  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
G5B91_24495  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
G5B91_24505  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
G5B91_31510  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
G5B91_06430  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
G5B91_06425  recC; exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
G5B91_06435  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
G5B91_34945  exodeoxyribonuclease [KO:K03581] [EC:3.1.11.5]
G5B91_09390  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
G5B91_00010  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
G5B91_33480  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
G5B91_20475  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
G5B91_03995  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
G5B91_21785  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
G5B91_12625  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
G5B91_23945  3'-5' exonuclease [KO:K02342] [EC:2.7.7.7]
G5B91_25830  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
G5B91_02635  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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