KEGG   PATHWAY: pod02020
Entry
pod02020                    Pathway                                
Name
Two-component system - Paenibacillus odorifer
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
pod02020  Two-component system
pod02020

Other DBs
GO: 0000160
Organism
Paenibacillus odorifer [GN:pod]
Gene
PODO_26395  histidine kinase [KO:K07636] [EC:2.7.13.3]
PODO_28885  membrane protein [KO:K07636] [EC:2.7.13.3]
PODO_09490  histidine kinase [KO:K07636] [EC:2.7.13.3]
PODO_09160  XRE family transcriptional regulator [KO:K07658]
PODO_09495  chemotaxis protein CheY [KO:K07658]
PODO_13200  response regulator [KO:K07658]
PODO_19760  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
PODO_19005  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
PODO_19920  transcriptional regulator [KO:K07776]
PODO_24810  phosphate ABC transporter substrate-binding protein [KO:K02040]
PODO_16210  phosphate-binding protein [KO:K02040]
PODO_20000  histidine kinase [KO:K07662]
PODO_01175  transcriptional regulator [KO:K07770]
PODO_08505  serine protease [KO:K04771] [EC:3.4.21.107]
PODO_30395  serine protease [KO:K04771] [EC:3.4.21.107]
PODO_28525  flagellin [KO:K02406]
PODO_03780  hypothetical protein [KO:K02406]
PODO_18335  RNA polymerase sigma factor SigD [KO:K02405]
PODO_00520  flagellar motor protein MotA [KO:K02556]
PODO_28175  flagellar motor protein MotA [KO:K02556]
PODO_13150  hypothetical protein [KO:K07646] [EC:2.7.13.3]
PODO_02720  histidine kinase [KO:K07646] [EC:2.7.13.3]
PODO_02705  potassium ABC transporter ATPase [KO:K01546]
PODO_02710  potassium-transporting ATPase subunit B [KO:K01547] [EC:7.2.2.6]
PODO_02715  potassium-transporting ATPase subunit C [KO:K01548]
PODO_20830  histidine kinase [KO:K07651] [EC:2.7.13.3]
PODO_14225  transcriptional regulator [KO:K07775]
PODO_20835  transcriptional regulator [KO:K07775]
PODO_25785  cytochrome Caa3 oxidase [KO:K02259] [EC:1.17.99.9]
PODO_30420  histidine kinase [KO:K07652] [EC:2.7.13.3]
PODO_08645  PhoP family transcriptional regulator [KO:K07668]
PODO_18970  transcriptional regulator [KO:K07668]
PODO_30425  PhoP family transcriptional regulator [KO:K07668]
PODO_09600  levansucrase [KO:K00692] [EC:2.4.1.10]
PODO_08510  transcriptional regulator [KO:K07669]
PODO_00010  chromosomal replication initiation protein [KO:K02313]
PODO_02065  histidine kinase [KO:K11629] [EC:2.7.13.3]
PODO_02070  PhoB family transcriptional regulator [KO:K11630]
PODO_02060  bacitracin ABC transporter ATP-binding protein [KO:K11631]
PODO_18990  bacitracin ABC transporter ATP-binding protein [KO:K11631]
PODO_02055  bacitracin ABC transporter permease [KO:K11632]
PODO_18985  ABC transporter permease [KO:K11632]
PODO_29245  lysyl transferase [KO:K14205] [EC:2.3.2.3]
PODO_21950  membrane protein [KO:K11633] [EC:2.7.13.3]
PODO_05185  membrane protein [KO:K11633] [EC:2.7.13.3]
PODO_21955  PhoB family transcriptional regulator [KO:K11634]
PODO_05190  transcriptional regulator [KO:K11634]
PODO_21945  bacitracin ABC transporter ATP-binding protein [KO:K11635]
PODO_05180  bacitracin ABC transporter ATP-binding protein [KO:K11635]
PODO_21940  hypothetical protein [KO:K11636]
PODO_05175  hypothetical protein [KO:K11636]
PODO_08905  histidine kinase [KO:K18345] [EC:2.7.13.3]
PODO_20930  DeoR faimly transcriptional regulator [KO:K18349]
PODO_29765  DeoR faimly transcriptional regulator [KO:K18349]
PODO_13780  peptidase M15 [KO:K08641] [EC:3.4.13.22]
PODO_29760  hypothetical protein [KO:K07260] [EC:3.4.17.14]
PODO_28950  peptidase M15 [KO:K07260] [EC:3.4.17.14]
PODO_16265  vancomycin resistance protein [KO:K18346]
PODO_06765  hypothetical protein [KO:K20487] [EC:2.7.13.3]
PODO_06760  multidrug ABC transporter [KO:K20488]
PODO_06745  lantibiotic ABC transporter ATP-binding protein [KO:K20490]
PODO_06750  hypothetical protein [KO:K20491]
PODO_06755  hypothetical protein [KO:K20492]
PODO_19345  histidine kinase [KO:K02491] [EC:2.7.13.3]
PODO_04630  hypothetical protein [KO:K07697] [EC:2.7.13.3]
PODO_04635  histidine kinase [KO:K07697] [EC:2.7.13.3]
PODO_19440  hypothetical protein [KO:K07697] [EC:2.7.13.3]
PODO_30105  sporulation kinase [KO:K07697] [EC:2.7.13.3]
PODO_00505  histidine kinase [KO:K13533] [EC:2.7.13.3]
PODO_01740  histidine kinase [KO:K13533] [EC:2.7.13.3]
PODO_00610  CheY-like receiver [KO:K02490]
PODO_24475  hypothetical protein [KO:K06375] [EC:2.7.-.-]
PODO_21500  chemotaxis protein CheY [KO:K07699]
PODO_11315  malate dehydrogenase [KO:K00027] [EC:1.1.1.38]
PODO_21310  hypothetical protein [KO:K07813]
PODO_11380  histidine kinase [KO:K07674] [EC:2.7.13.3]
PODO_21440  narZ; nitrate reductase [KO:K00370] [EC:1.7.5.1 1.7.99.-]
PODO_21435  narH; nitrate reductase [KO:K00371] [EC:1.7.5.1 1.7.99.-]
PODO_21425  nitrate reductase [KO:K00374] [EC:1.7.5.1 1.7.99.-]
PODO_21430  nitrate reductase [KO:K00373]
PODO_28545  carbon storage regulator CsrA [KO:K03563]
PODO_27135  hypothetical protein [KO:K07680] [EC:2.7.13.3]
PODO_21145  LuxR family transcriptional regulator [KO:K07691]
PODO_27130  LuxR family transcriptional regulator [KO:K07691]
PODO_28605  histidine kinase [KO:K07777] [EC:2.7.13.3]
PODO_28600  chemotaxis protein CheY [KO:K07692]
PODO_01975  histidine kinase [KO:K07778] [EC:2.7.13.3]
PODO_12715  histidine kinase [KO:K07778] [EC:2.7.13.3]
PODO_01980  hypothetical protein [KO:K07693]
PODO_12720  transcriptional regulatory protein DesR [KO:K07693]
PODO_12710  fatty acid desaturase [KO:K10255] [EC:1.14.19.23 1.14.19.45]
PODO_08495  histidine kinase [KO:K11617] [EC:2.7.13.3]
PODO_04665  histidine kinase [KO:K11617] [EC:2.7.13.3]
PODO_26360  histidine kinase [KO:K11617] [EC:2.7.13.3]
PODO_08500  LuxR family transcriptional regulator [KO:K11618]
PODO_26355  LuxR family transcriptional regulator [KO:K11618]
PODO_08490  hypothetical protein [KO:K11622]
PODO_26365  membrane protein [KO:K11622]
PODO_21415  histidine kinase [KO:K07683] [EC:2.7.13.3]
PODO_21410  LuxR family transcriptional regulator [KO:K07696]
PODO_21420  control of nitrate reduction [KO:K10851]
PODO_05755  pilus assembly protein [KO:K02283] [EC:7.4.2.8]
PODO_05830  hypothetical protein [KO:K02283] [EC:7.4.2.8]
PODO_08355  type II secretion system protein E [KO:K02283] [EC:7.4.2.8]
PODO_05760  pilus assembly protein TadB [KO:K12510]
PODO_05765  type II secretion protein F [KO:K12511]
PODO_16995  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
PODO_08530  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
PODO_06080  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PODO_26770  chemotaxis protein CheR [KO:K00575] [EC:2.1.1.80]
PODO_20615  chemotaxis protein CheR [KO:K00575] [EC:2.1.1.80]
PODO_20795  chemotaxis protein [KO:K03406]
PODO_21140  chemotaxis protein [KO:K03406]
PODO_06065  chemotaxis protein [KO:K03406]
PODO_02180  hypothetical protein [KO:K03406]
PODO_08000  hypothetical protein [KO:K03406]
PODO_08080  hypothetical protein [KO:K03406]
PODO_13220  chemotaxis protein [KO:K03406]
PODO_08730  histidine kinase [KO:K03406]
PODO_28985  hypothetical protein [KO:K03406]
PODO_29090  chemotaxis protein [KO:K03406]
PODO_04525  hypothetical protein [KO:K03406]
PODO_09955  chemotaxis protein [KO:K03406]
PODO_10415  chemotaxis protein [KO:K03406]
PODO_18355  chemotaxis protein CheW [KO:K03408]
PODO_29480  hypothetical protein [KO:K03407] [EC:2.7.13.3]
PODO_18360  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
PODO_18410  chemotaxis protein CheY [KO:K03413]
PODO_18365  chemotaxis protein CheY [KO:K03412] [EC:3.1.1.61 3.5.1.44]
PODO_21135  hypothetical protein [KO:K03412] [EC:3.1.1.61 3.5.1.44]
PODO_21995  Crp/Fnr family transcriptional regulator [KO:K10914]
PODO_17645  cAMP-binding protein [KO:K10914]
PODO_29845  hypothetical protein [KO:K10914]
PODO_29980  sodium:alanine symporter [KO:K11626]
PODO_21765  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_21820  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_11035  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_05565  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_07800  helicase Ski2 [KO:K07718] [EC:2.7.13.3]
PODO_08005  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_13965  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_23840  helicase Ski2 [KO:K07718] [EC:2.7.13.3]
PODO_19710  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_30065  sensor with HAMP domain protein [KO:K07718] [EC:2.7.13.3]
PODO_10515  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_10845  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_04000  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_04230  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_09270  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_04340  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_09585  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_14840  signal protein [KO:K07718] [EC:2.7.13.3]
PODO_20055  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_24995  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_14740  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_16225  peptidase C56 [KO:K07718] [EC:2.7.13.3]
PODO_06720  membrane protein [KO:K07718] [EC:2.7.13.3]
PODO_06810  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_21000  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_26160  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_22115  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_02330  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_12965  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_15280  membrane protein [KO:K07718] [EC:2.7.13.3]
PODO_15335  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_25075  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_30200  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_21730  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_12690  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_17845  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_22540  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_26875  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_12480  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_17580  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_22385  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_22485  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_15765  hypothetical protein [KO:K07718] [EC:2.7.13.3]
PODO_09075  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_18900  histidine kinase [KO:K07718] [EC:2.7.13.3]
PODO_21760  AraC family transcriptional regulator [KO:K07720]
PODO_21815  AraC family transcriptional regulator [KO:K07720]
PODO_26230  AraC family transcriptional regulator [KO:K07720]
PODO_05570  chemotaxis protein CheY [KO:K07720]
PODO_22455  hypothetical protein [KO:K07720]
PODO_08045  AraC family transcriptional regulator [KO:K07720]
PODO_03490  hypothetical protein [KO:K07720]
PODO_23835  AraC family transcriptional regulator [KO:K07720]
PODO_10850  hypothetical protein [KO:K07720]
PODO_04005  response regulator [KO:K07720]
PODO_04225  hypothetical protein [KO:K07720]
PODO_09275  hypothetical protein [KO:K07720]
PODO_04335  hypothetical protein [KO:K07720]
PODO_09590  chemotaxis protein CheY [KO:K07720]
PODO_14835  response regulator receiver protein [KO:K07720]
PODO_20050  hypothetical protein [KO:K07720]
PODO_24990  hypothetical protein [KO:K07720]
PODO_14745  hypothetical protein [KO:K07720]
PODO_19705  AraC family transcriptional regulator [KO:K07720]
PODO_11030  AraC family transcriptional regulator [KO:K07720]
PODO_16230  hypothetical protein [KO:K07720]
PODO_06715  AraC family transcriptional regulator [KO:K07720]
PODO_20995  chemotaxis protein CheY [KO:K07720]
PODO_26155  AraC family transcriptional regulator [KO:K07720]
PODO_26165  hypothetical protein [KO:K07720]
PODO_22120  hypothetical protein [KO:K07720]
PODO_02335  AraC family transcriptional regulator [KO:K07720]
PODO_07805  AraC family transcriptional regulator [KO:K07720]
PODO_12970  hypothetical protein [KO:K07720]
PODO_15285  AraC family transcriptional regulator [KO:K07720]
PODO_15340  hypothetical protein [KO:K07720]
PODO_20265  transcriptional regulator [KO:K07720]
PODO_25070  hypothetical protein [KO:K07720]
PODO_30060  AraC family transcriptional regulator [KO:K07720]
PODO_30205  hypothetical protein [KO:K07720]
PODO_21735  hypothetical protein [KO:K07720]
PODO_12700  response regulator [KO:K07720]
PODO_17850  hypothetical protein [KO:K07720]
PODO_22565  response regulator [KO:K07720]
PODO_26870  hypothetical protein [KO:K07720]
PODO_10510  hypothetical protein [KO:K07720]
PODO_12485  AraC family transcriptional regulator [KO:K07720]
PODO_17575  hypothetical protein [KO:K07720]
PODO_22380  AraC family transcriptional regulator [KO:K07720]
PODO_22490  hypothetical protein [KO:K07720]
PODO_15770  hypothetical protein [KO:K07720]
PODO_09080  chemotaxis protein CheY [KO:K07720]
PODO_13960  AraC family transcriptional regulator [KO:K07720]
PODO_18905  AraC family transcriptional regulator [KO:K07720]
PODO_15715  cytochrome D ubiquinol oxidase subunit I [KO:K00425] [EC:7.1.1.7]
PODO_30380  cytochrome D ubiquinol oxidase subunit I [KO:K00425] [EC:7.1.1.7]
PODO_15720  cytochrome D ubiquinol oxidase subunit II [KO:K00426] [EC:7.1.1.7]
PODO_30375  cytochrome d ubiquinol oxidase subunit 2 [KO:K00426] [EC:7.1.1.7]
PODO_16850  phosphotyrosine protein phosphatase [KO:K25307] [EC:3.1.3.48]
PODO_28775  UDP-N-acetylglucosamine 2-epimerase [KO:K01791] [EC:5.1.3.14]
PODO_25415  UDP-N-acetylglucosamine 2-epimerase [KO:K01791] [EC:5.1.3.14]
PODO_09770  pectin methylesterase [KO:K01051] [EC:3.1.1.11]
PODO_09235  pectin esterase [KO:K01051] [EC:3.1.1.11]
PODO_03930  glycosyl hydrolase family 5 [KO:K01179] [EC:3.2.1.4]
PODO_11280  glycoside hydrolase [KO:K01179] [EC:3.2.1.4]
PODO_03840  cellulase [KO:K01179] [EC:3.2.1.4]
PODO_24050  endoglucanase [KO:K01179] [EC:3.2.1.4]
PODO_03765  histidine kinase [KO:K20974] [EC:2.7.13.3]
PODO_26765  histidine kinase [KO:K20974] [EC:2.7.13.3]
PODO_28575  flagellar synthesis anti-sigma-D factor [KO:K02398]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
  Authors
Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
  Journal
J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
  Authors
Batchelor E, Walthers D, Kenney LJ, Goulian M.
  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
  Authors
Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
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Adv Appl Microbiol 66:53-75 (2009)
DOI:10.1016/S0065-2164(08)00803-4
Reference
PMID:8760916
  Authors
Eder S, Shi L, Jensen K, Yamane K, Hulett FM
  Title
A Bacillus subtilis secreted phosphodiesterase/alkaline phosphatase is the product of a Pho regulon gene, phoD.
  Journal
Microbiology 142 ( Pt 8):2041-7 (1996)
DOI:10.1099/13500872-142-8-2041
Related
pathway
pod00190  Oxidative phosphorylation
pod00550  Peptidoglycan biosynthesis
pod00910  Nitrogen metabolism
pod02030  Bacterial chemotaxis
pod02040  Flagellar assembly
pod03070  Bacterial secretion system
KO pathway
ko02020   
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