KEGG   PATHWAY: ppad04146
Entry
ppad04146                   Pathway                                
Name
Peroxisome - Panthera pardus (leopard)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
ppad04146  Peroxisome
ppad04146

Other DBs
GO: 0005777
Organism
Panthera pardus (leopard) [GN:ppad]
Gene
109245091  PEX16; peroxisomal biogenesis factor 16 isoform X1 [KO:K13335]
109252533  PEX3; peroxisomal biogenesis factor 3 isoform X1 [KO:K13336]
109257279  PEX19; peroxisomal biogenesis factor 19 isoform X1 [KO:K13337]
109271870  ABCD3; ATP-binding cassette sub-family D member 3 isoform X1 [KO:K05677] [EC:7.6.2.4]
109263683  PEX1; peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
109271637  PEX6; peroxisome biogenesis factor 6 isoform X1 [KO:K13339]
109276283  PEX26; peroxisome assembly protein 26 isoform X1 [KO:K13340]
109249882  PEX7; peroxisomal biogenesis factor 7 [KO:K13341]
109276083  PEX5; peroxisomal biogenesis factor 5 isoform X1 [KO:K13342]
109275172  PEX5L; PEX5-related protein isoform X1 [KO:K13342]
109274097  PEX14; peroxisomal membrane protein PEX14 isoform X1 [KO:K13343]
109255430  PEX13; peroxisome biogenesis factor 13 [KO:K13344]
109251950  PEX12; peroxisome assembly protein 12 [KO:K13345]
109273965  PEX10; peroxisome biogenesis factor 10 [KO:K13346]
109269369  PEX2; peroxisome biogenesis factor 2 isoform X1 [KO:K06664]
109260671  PXMP2; peroxisomal membrane protein 2 [KO:K13347]
109266822  MPV17; protein Mpv17 [KO:K13348]
109247610  MPV17L2; mpv17-like protein 2 isoform X1 [KO:K13348]
109278367  MPV17L; mpv17-like protein isoform X1 [KO:K13349]
109272549  PXMP4; peroxisomal membrane protein 4 isoform X1 [KO:K13350]
109273439  PEX11A; peroxisomal membrane protein 11A isoform X1 [KO:K13351]
109259163  PEX11B; peroxisomal membrane protein 11B isoform X1 [KO:K13352]
109254172  PEX11G; peroxisomal membrane protein 11C isoform X1 [KO:K13353]
109265609  SLC25A17; peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
109258811  HACL1; 2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
109267726  AMACR; alpha-methylacyl-CoA racemase [KO:K01796] [EC:5.1.99.4]
109273714  PHYH; phytanoyl-CoA dioxygenase, peroxisomal isoform X1 [KO:K00477] [EC:1.14.11.18]
109269729  ACOX3; peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [KO:K00232] [EC:1.3.3.6]
109276909  ACOX1; peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
109279078  ACOX2; peroxisomal acyl-coenzyme A oxidase 2 [KO:K10214] [EC:1.17.99.3]
109278892  HSD17B4; peroxisomal multifunctional enzyme type 2 isoform X1 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
109266864  SCP2; non-specific lipid-transfer protein isoform X1 [KO:K08764] [EC:2.3.1.176]
109270057  acyl-coenzyme A amino acid N-acyltransferase 1-like isoform X1 [KO:K00659] [EC:2.3.1.65 3.1.2.2]
109270058  bile acid-CoA:amino acid N-acyltransferase-like [KO:K00659] [EC:2.3.1.65 3.1.2.2]
109275245  EHHADH; peroxisomal bifunctional enzyme [KO:K07514] [EC:4.2.1.17 1.1.1.35 5.3.3.8]
109248748  ACAA1; 3-ketoacyl-CoA thiolase, peroxisomal [KO:K07513] [EC:2.3.1.16]
109259629  DECR2; peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [KO:K13237] [EC:1.3.1.124]
109256640  ECH1; delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
109259854  ABCD1; ATP-binding cassette sub-family D member 1 [KO:K05675] [EC:7.6.2.4]
109268822  ABCD2; ATP-binding cassette sub-family D member 2 [KO:K05676] [EC:7.6.2.4]
109253825  ABCD4; ATP-binding cassette sub-family D member 4 isoform X1 [KO:K05678] [EC:7.6.2.8]
109263004  SLC27A2; very long-chain acyl-CoA synthetase [KO:K08746] [EC:6.2.1.- 6.2.1.3]
109272907  ACSL5; long-chain-fatty-acid--CoA ligase 5 isoform X1 [KO:K01897] [EC:6.2.1.3]
109253666  ACSL4; long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
109251013  ACSL1; long-chain-fatty-acid--CoA ligase 1 isoform X1 [KO:K01897] [EC:6.2.1.3]
109264992  ACSL3; long-chain-fatty-acid--CoA ligase 3 isoform X1 [KO:K01897] [EC:6.2.1.3]
109250899  ACSL6; long-chain-fatty-acid--CoA ligase 6 isoform X1 [KO:K01897] [EC:6.2.1.3]
109265104  PECR; peroxisomal trans-2-enoyl-CoA reductase [KO:K07753] [EC:1.3.1.38]
109249450  ECI2; enoyl-CoA delta isomerase 2, mitochondrial isoform X1 [KO:K13239] [EC:5.3.3.8]
109245672  NUDT7; peroxisomal coenzyme A diphosphatase NUDT7 isoform X1 [KO:K17879] [EC:3.6.1.77]
109267629  NUDT12; peroxisomal NADH pyrophosphatase NUDT12 [KO:K03426] [EC:3.6.1.22]
109264404  NUDT13; nucleoside diphosphate-linked moiety X motif 13 isoform X1 [KO:K03426] [EC:3.6.1.22]
109251588  NUDT19; nucleoside diphosphate-linked moiety X motif 19 isoform X1 [KO:K13355] [EC:3.6.1.77]
109272355  ACOT8; acyl-coenzyme A thioesterase 8 isoform X1 [KO:K11992] [EC:3.1.2.27]
109250043  CRAT; carnitine O-acetyltransferase isoform X1 [KO:K00624] [EC:2.3.1.7]
109263645  CROT; peroxisomal carnitine O-octanoyltransferase [KO:K05940] [EC:2.3.1.137]
109245626  MLYCD; malonyl-CoA decarboxylase, mitochondrial [KO:K01578] [EC:4.1.1.9]
109248934  GNPAT; dihydroxyacetone phosphate acyltransferase isoform X1 [KO:K00649] [EC:2.3.1.42]
109273571  AGPS; alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1 [KO:K00803] [EC:2.5.1.26]
109268785  FAR2; fatty acyl-CoA reductase 2 [KO:K13356] [EC:1.2.1.84]
109271160  FAR1; fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
109277472  MVK; mevalonate kinase isoform X1 [KO:K00869] [EC:2.7.1.36]
109256353  PMVK; phosphomevalonate kinase isoform X1 [KO:K13273] [EC:2.7.4.2]
109264797  AGXT; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
109277485  DAO; D-amino-acid oxidase [KO:K00273] [EC:1.4.3.3]
109263538  DDO; D-aspartate oxidase isoform X1 [KO:K00272] [EC:1.4.3.1]
109273452  IDH2; isocitrate dehydrogenase [NADP], mitochondrial isoform X1 [KO:K00031] [EC:1.1.1.42]
109265146  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
109256703  PAOX; peroxisomal N(1)-acetyl-spermine/spermidine oxidase [KO:K00308] [EC:1.5.3.13]
109251823  PIPOX; peroxisomal sarcosine oxidase isoform X1 [KO:K00306] [EC:1.5.3.1 1.5.3.7]
109271779  HMGCLL1; 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1 [KO:K01640] [EC:4.1.3.4]
109274305  HMGCL; hydroxymethylglutaryl-CoA lyase, mitochondrial [KO:K01640] [EC:4.1.3.4]
109274725  HAO1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
109272159  HAO2; hydroxyacid oxidase 2 isoform X1 [KO:K11517] [EC:1.1.3.15]
109279168  CAT; catalase [KO:K03781] [EC:1.11.1.6]
109246667  PRDX5; peroxiredoxin-5, mitochondrial isoform X1 [KO:K11187] [EC:1.11.1.24]
109249683  SOD1; superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
109245386  SOD2; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
109251875  NOS2; nitric oxide synthase, inducible isoform X1 [KO:K13241] [EC:1.14.13.39]
109266973  PRDX1; peroxiredoxin-1 [KO:K13279] [EC:1.11.1.24]
109262341  EPHX2; bifunctional epoxide hydrolase 2 isoform X1 [KO:K08726] [EC:3.3.2.10 3.1.3.76]
109269174  GSTK1; glutathione S-transferase kappa 1 [KO:K13299] [EC:2.5.1.18]
109262396  XDH; xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
109261405  xanthine dehydrogenase/oxidase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
109254998  dehydrogenase/reductase SDR family member 4 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
ppad00071  Fatty acid degradation
ppad00120  Primary bile acid biosynthesis
ppad00230  Purine metabolism
ppad00564  Glycerophospholipid metabolism
ppad00565  Ether lipid metabolism
ppad00830  Retinol metabolism
ppad00900  Terpenoid backbone biosynthesis
ppad03320  PPAR signaling pathway
KO pathway
ko04146   
LinkDB

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