KEGG   PATHWAY: ppae00970
Entry
ppae00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pseudomonas palleroniana
Class
Genetic Information Processing; Translation
Pathway map
ppae00970  Aminoacyl-tRNA biosynthesis
ppae00970

Organism
Pseudomonas palleroniana [GN:ppae]
Gene
LDL65_05535  tRNA-Met [KO:K14230]
LDL65_01375  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
LDL65_15620  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LDL65_16655  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LDL65_15615  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
LDL65_15625  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
LDL65_28645  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
LDL65_04200  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
LDL65_05155  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
LDL65_11200  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
LDL65_11195  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
LDL65_01075  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
LDL65_28210  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
LDL65_28640  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
LDL65_17005  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
LDL65_11230  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
LDL65_24375  valS; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
LDL65_16555  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
LDL65_07475  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
LDL65_15150  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
LDL65_17285  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
LDL65_13275  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
LDL65_05520  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
LDL65_05840  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
LDL65_01055  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
LDL65_04560  hypothetical protein [KO:K01889] [EC:6.1.1.20]
LDL65_01050  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
LDL65_08215  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
LDL65_15505  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ppae00250  Alanine, aspartate and glutamate metabolism
ppae00260  Glycine, serine and threonine metabolism
ppae00270  Cysteine and methionine metabolism
ppae00290  Valine, leucine and isoleucine biosynthesis
ppae00300  Lysine biosynthesis
ppae00330  Arginine and proline metabolism
ppae00340  Histidine metabolism
ppae00380  Tryptophan metabolism
ppae00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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