KEGG   PATHWAY: psih00970
Entry
psih00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pseudomonas sichuanensis
Class
Genetic Information Processing; Translation
Pathway map
psih00970  Aminoacyl-tRNA biosynthesis
psih00970

Organism
Pseudomonas sichuanensis [GN:psih]
Gene
LOY51_00080  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
LOY51_00085  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
LOY51_00115  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
LOY51_00595  [KO:K14227]
LOY51_00600  [KO:K14218]
LOY51_00980  [KO:K14219]
LOY51_01580  [KO:K14234]
LOY51_01650  [KO:K14231]
LOY51_02185  [KO:K14230]
LOY51_02435  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
LOY51_02445  [KO:K14227]
LOY51_02450  [KO:K14218]
LOY51_02480  [KO:K14236]
LOY51_02485  [KO:K14225]
LOY51_02490  [KO:K14234]
LOY51_02500  [KO:K14235]
LOY51_02970  selA; L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
LOY51_02980  [KO:K14238]
LOY51_03395  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
LOY51_03820  [KO:K14228]
LOY51_03825  [KO:K14230]
LOY51_04050  [KO:K14227]
LOY51_04055  [KO:K14218]
LOY51_04100  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
LOY51_04175  [KO:K14220]
LOY51_04180  [KO:K14232]
LOY51_04185  [KO:K14229]
LOY51_04245  [KO:K14234]
LOY51_04835  [KO:K01867] [EC:6.1.1.2]
LOY51_05415  [KO:K14225]
LOY51_05850  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
LOY51_06020  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
LOY51_06300  [KO:K14227]
LOY51_06305  [KO:K14218]
LOY51_06825  [KO:K14237]
LOY51_06830  [KO:K14221]
LOY51_07680  [KO:K14233]
LOY51_07860  [KO:K14224]
LOY51_07865  [KO:K14225]
LOY51_07870  [KO:K14224]
LOY51_07875  [KO:K14225]
LOY51_07880  [KO:K14225]
LOY51_08085  [KO:K14220]
LOY51_08110  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
LOY51_08115  [KO:K14218]
LOY51_08120  [KO:K14224]
LOY51_08125  [KO:K14218]
LOY51_08130  [KO:K14224]
LOY51_08135  [KO:K14218]
LOY51_08140  [KO:K14224]
LOY51_08265  [KO:K14237]
LOY51_08270  [KO:K14221]
LOY51_08275  [KO:K14221]
LOY51_08280  [KO:K14221]
LOY51_08925  [KO:K14232]
LOY51_09770  [KO:K14219]
LOY51_09775  [KO:K14226]
LOY51_09780  [KO:K14228]
LOY51_09785  [KO:K14226]
LOY51_10075  [KO:K14223]
LOY51_11700  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LOY51_11705  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LOY51_14515  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
LOY51_14520  [KO:K01886] [EC:6.1.1.18]
LOY51_16555  [KO:K14237]
LOY51_16625  [KO:K14237]
LOY51_17115  [KO:K14228]
LOY51_17145  [KO:K14222]
LOY51_17240  [KO:K14233]
LOY51_17290  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
LOY51_17785  [KO:K14232]
LOY51_17800  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
LOY51_17805  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
LOY51_17825  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
LOY51_18010  [KO:K14225]
LOY51_18310  [KO:K14218]
LOY51_18315  [KO:K14227]
LOY51_19615  [KO:K14219]
LOY51_19635  [KO:K14219]
LOY51_19640  [KO:K14219]
LOY51_19645  [KO:K14219]
LOY51_19650  [KO:K14219]
LOY51_19655  [KO:K14233]
LOY51_19670  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
LOY51_20345  [KO:K14233]
LOY51_20420  [KO:K14229]
LOY51_20490  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
LOY51_20530  [KO:K01881] [EC:6.1.1.15]
LOY51_20545  [KO:K14230]
LOY51_20550  [KO:K14230]
LOY51_20555  [KO:K14230]
LOY51_21530  [KO:K01873] [EC:6.1.1.9]
LOY51_21755  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
LOY51_21760  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LOY51_21765  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
LOY51_21980  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
LOY51_22095  [KO:K14228]
LOY51_22975  [KO:K14223]
LOY51_23100  [KO:K14230]
LOY51_23565  [KO:K14218]
LOY51_23570  [KO:K14227]
LOY51_24220  [KO:K14228]
LOY51_24225  [KO:K14228]
LOY51_25395  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
psih00250  Alanine, aspartate and glutamate metabolism
psih00260  Glycine, serine and threonine metabolism
psih00270  Cysteine and methionine metabolism
psih00290  Valine, leucine and isoleucine biosynthesis
psih00300  Lysine biosynthesis
psih00330  Arginine and proline metabolism
psih00340  Histidine metabolism
psih00380  Tryptophan metabolism
psih00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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