KEGG   PATHWAY: rap00970
Entry
rap00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rhodovastum atsumiense
Class
Genetic Information Processing; Translation
Pathway map
rap00970  Aminoacyl-tRNA biosynthesis
rap00970

Organism
Rhodovastum atsumiense [GN:rap]
Gene
RHOA_TRNA29  tRNA-Ala [KO:K14218]
RHOA_TRNA19  tRNA-Ala [KO:K14218]
RHOA_TRNA2  tRNA-Ala [KO:K14218]
RHOA_TRNA23  tRNA-Ala [KO:K14218]
RHOA_TRNA36  tRNA-Ala [KO:K14218]
RHOA_TRNA54  tRNA-Ala [KO:K14218]
RHOA_TRNA32  tRNA-Ala [KO:K14218]
RHOA_TRNA43  tRNA-Arg [KO:K14219]
RHOA_TRNA34  tRNA-Arg [KO:K14219]
RHOA_TRNA42  tRNA-Arg [KO:K14219]
RHOA_TRNA49  tRNA-Asp [KO:K14221]
RHOA_TRNA15  tRNA-Gln [KO:K14223]
RHOA_TRNA10  tRNA-Glu [KO:K14224]
RHOA_TRNA11  tRNA-Glu [KO:K14224]
RHOA_TRNA31  tRNA-Gly [KO:K14225]
RHOA_TRNA28  tRNA-Gly [KO:K14225]
RHOA_TRNA38  tRNA-Gly [KO:K14225]
RHOA_TRNA20  tRNA-Ile [KO:K14227]
RHOA_TRNA24  tRNA-Ile [KO:K14227]
RHOA_TRNA3  tRNA-Ile [KO:K14227]
RHOA_TRNA35  tRNA-Ile [KO:K14227]
RHOA_TRNA55  tRNA-Ile [KO:K14227]
RHOA_TRNA47  tRNA-Leu [KO:K14228]
RHOA_TRNA48  tRNA-Leu [KO:K14228]
RHOA_TRNA45  tRNA-Leu [KO:K14228]
RHOA_TRNA51  tRNA-Leu [KO:K14228]
RHOA_TRNA8  tRNA-Lys [KO:K14229]
RHOA_TRNA1  tRNA-Met [KO:K14230]
RHOA_TRNA22  tRNA-Met [KO:K14230]
RHOA_TRNA37  tRNA-Met [KO:K14230]
RHOA_TRNA53  tRNA-Met [KO:K14230]
RHOA_TRNA13  tRNA-Phe [KO:K14231]
RHOA_TRNA26  tRNA-Pro [KO:K14232]
RHOA_TRNA6  tRNA-Pro [KO:K14232]
RHOA_TRNA56  tRNA-Pro [KO:K14232]
RHOA_TRNA52  tRNA-Ser [KO:K14233]
RHOA_TRNA12  tRNA-Thr [KO:K14234]
RHOA_TRNA17  tRNA-Tyr [KO:K14236]
RHOA_TRNA14  tRNA-Val [KO:K14237]
RHOA_TRNA7  tRNA-Val [KO:K14237]
RHOA_1209  gltX; Glutamate--tRNA ligase 1 [KO:K01885] [EC:6.1.1.17]
RHOA_6086  gltX; Glutamate--tRNA ligase 2 [KO:K01885] [EC:6.1.1.17]
RHOA_0588  gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
RHOA_2050  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
RHOA_3082  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
RHOA_0587  gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
RHOA_0589  gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
RHOA_5907  glnS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
RHOA_0767  alaS; alanine--tRNA ligase/DNA-binding transcriptional repressor [KO:K01872] [EC:6.1.1.7]
RHOA_2980  aspS; Aspartate--tRNA(Asp/Asn) ligase [KO:K01876] [EC:6.1.1.12]
RHOA_2929  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
RHOA_2930  glyS; Glycine--tRNA ligase beta subunit [KO:K01879] [EC:6.1.1.14]
RHOA_5967  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
RHOA_5804  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
RHOA_3067  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
RHOA_5562  metG; Methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
RHOA_1444  fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase [KO:K00604] [EC:2.1.2.9]
RHOA_0517  valS; Valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
RHOA_2278  leuS; Leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
RHOA_2589  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
RHOA_5634  lysS; Lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
RHOA_6247  argS; Arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
RHOA_6014  proS; Proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
RHOA_4907  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
RHOA_1369  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
RHOA_1368  pheT; Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
RHOA_2884  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
RHOA_2083  trpS; Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rap00250  Alanine, aspartate and glutamate metabolism
rap00260  Glycine, serine and threonine metabolism
rap00270  Cysteine and methionine metabolism
rap00290  Valine, leucine and isoleucine biosynthesis
rap00300  Lysine biosynthesis
rap00330  Arginine and proline metabolism
rap00340  Histidine metabolism
rap00380  Tryptophan metabolism
rap00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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