KEGG   PATHWAY: serm00970
Entry
serm00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Serratia sp. MYb239
Class
Genetic Information Processing; Translation
Pathway map
serm00970  Aminoacyl-tRNA biosynthesis
serm00970

Organism
Serratia sp. MYb239 [GN:serm]
Gene
CLM71_16900  tRNA-Ala [KO:K14218]
CLM71_16895  tRNA-Ala [KO:K14218]
CLM71_01305  tRNA-Ala [KO:K14218]
CLM71_18335  tRNA-Ala [KO:K14218]
CLM71_22845  tRNA-Ala [KO:K14218]
CLM71_03875  tRNA-Arg [KO:K14219]
CLM71_05325  tRNA-Arg [KO:K14219]
CLM71_00775  tRNA-Arg [KO:K14219]
CLM71_16800  tRNA-Arg [KO:K14219]
CLM71_03880  tRNA-Arg [KO:K14219]
CLM71_03885  tRNA-Arg [KO:K14219]
CLM71_15065  tRNA-Asn [KO:K14220]
CLM71_15090  tRNA-Asn [KO:K14220]
CLM71_15360  tRNA-Asn [KO:K14220]
CLM71_15720  tRNA-Asn [KO:K14220]
CLM71_04135  tRNA-Asp [KO:K14221]
CLM71_04255  tRNA-Asp [KO:K14221]
CLM71_22830  tRNA-Asp [KO:K14221]
CLM71_08535  tRNA-Cys [KO:K14222]
CLM71_05535  tRNA-Gln [KO:K14223]
CLM71_05545  tRNA-Gln [KO:K14223]
CLM71_05550  tRNA-Gln [KO:K14223]
CLM71_01485  tRNA-Glu [KO:K14224]
CLM71_04120  tRNA-Glu [KO:K14224]
CLM71_21745  tRNA-Glu [KO:K14224]
CLM71_23485  tRNA-Glu [KO:K14224]
CLM71_19005  tRNA-Gly [KO:K14225]
CLM71_01675  tRNA-Gly [KO:K14225]
CLM71_01350  tRNA-Gly [KO:K14225]
CLM71_01680  tRNA-Gly [KO:K14225]
CLM71_01685  tRNA-Gly [KO:K14225]
CLM71_08530  tRNA-Gly [KO:K14225]
CLM71_00780  tRNA-His [KO:K14226]
CLM71_01300  tRNA-Ile [KO:K14227]
CLM71_18340  tRNA-Ile [KO:K14227]
CLM71_22850  tRNA-Ile [KO:K14227]
CLM71_05555  tRNA-Leu [KO:K14228]
CLM71_08540  tRNA-Leu [KO:K14228]
CLM71_02020  tRNA-Leu [KO:K14228]
CLM71_02435  tRNA-Leu [KO:K14228]
CLM71_00785  tRNA-Leu [KO:K14228]
CLM71_02875  tRNA-Leu [KO:K14228]
CLM71_02880  tRNA-Leu [KO:K14228]
CLM71_02885  tRNA-Leu [KO:K14228]
CLM71_05845  tRNA-Lys [KO:K14229]
CLM71_05855  tRNA-Lys [KO:K14229]
CLM71_05865  tRNA-Lys [KO:K14229]
CLM71_16925  tRNA-Lys [KO:K14229]
CLM71_05560  tRNA-Met [KO:K14230]
CLM71_02025  tRNA-Met [KO:K14230]
CLM71_05540  tRNA-Met [KO:K14230]
CLM71_18635  tRNA-Met [KO:K14230]
CLM71_18640  tRNA-Met [KO:K14230]
CLM71_18645  tRNA-Met [KO:K14230]
CLM71_20680  tRNA-Met [KO:K14230]
CLM71_01555  tRNA-Phe [KO:K14231]
CLM71_19750  tRNA-Phe [KO:K14231]
CLM71_15995  tRNA-Pro [KO:K14232]
CLM71_00585  tRNA-Pro [KO:K14232]
CLM71_00790  tRNA-Pro [KO:K14232]
CLM71_03870  tRNA-Ser [KO:K14233]
CLM71_13225  tRNA-Ser [KO:K14233]
CLM71_08145  tRNA-Ser [KO:K14233]
CLM71_16145  tRNA-Ser [KO:K14233]
CLM71_13240  tRNA-Ser [KO:K14233]
CLM71_01355  tRNA-Thr [KO:K14234]
CLM71_21730  tRNA-Thr [KO:K14234]
CLM71_04455  tRNA-Thr [KO:K14234]
CLM71_01340  tRNA-Thr [KO:K14234]
CLM71_16020  tRNA-Thr [KO:K14234]
CLM71_22825  tRNA-Trp [KO:K14235]
CLM71_01345  tRNA-Tyr [KO:K14236]
CLM71_12790  tRNA-Tyr [KO:K14236]
CLM71_12795  tRNA-Tyr [KO:K14236]
CLM71_10660  tRNA-Val [KO:K14237]
CLM71_05850  tRNA-Val [KO:K14237]
CLM71_16910  tRNA-Val [KO:K14237]
CLM71_16915  tRNA-Val [KO:K14237]
CLM71_16920  tRNA-Val [KO:K14237]
CLM71_10665  tRNA-Val [KO:K14237]
CLM71_10670  tRNA-Val [KO:K14237]
CLM71_00420  tRNA-Sec [KO:K14238]
CLM71_16905  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CLM71_19075  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CLM71_05600  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
CLM71_03860  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
CLM71_15295  hypothetical protein [KO:K01872] [EC:6.1.1.7]
CLM71_13105  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CLM71_07960  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
CLM71_00145  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
CLM71_00150  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
CLM71_09770  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CLM71_07795  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CLM71_00235  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
CLM71_21165  SelA-like pyridoxal phosphate-dependent enzyme [KO:K01042] [EC:2.9.1.1]
CLM71_05300  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CLM71_07215  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CLM71_21790  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CLM71_02320  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CLM71_05445  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CLM71_03155  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
CLM71_19010  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CLM71_13160  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CLM71_18380  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CLM71_17795  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CLM71_09795  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
CLM71_09800  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
CLM71_10825  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CLM71_06800  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
CLM71_22220  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
serm00250  Alanine, aspartate and glutamate metabolism
serm00260  Glycine, serine and threonine metabolism
serm00270  Cysteine and methionine metabolism
serm00290  Valine, leucine and isoleucine biosynthesis
serm00300  Lysine biosynthesis
serm00330  Arginine and proline metabolism
serm00340  Histidine metabolism
serm00380  Tryptophan metabolism
serm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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