KEGG   PATHWAY: sita03022
Entry
sita03022                   Pathway                                
Name
Basal transcription factors - Setaria italica (foxtail millet)
Class
Genetic Information Processing; Transcription
Pathway map
sita03022  Basal transcription factors
sita03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Setaria italica (foxtail millet) [GN:sita]
Gene
101780652  transcription initiation factor IIA subunit 1 [KO:K03122]
101780710  transcription initiation factor IIA subunit 2 [KO:K03123]
101754167  transcription initiation factor IIA subunit 2 isoform X2 [KO:K03123]
101777563  transcription initiation factor IIB [KO:K03124]
101777982  transcription initiation factor IIB [KO:K03124]
101772902  transcription initiation factor IIB [KO:K03124]
101753362  transcription initiation factor IIB [KO:K03124]
101761367  plant-specific TFIIB-related protein 1 [KO:K03124]
101755927  TATA-box-binding protein 2 [KO:K03120]
101756873  TATA-box-binding protein 2 [KO:K03120]
101765944  TATA-box-binding protein 1 [KO:K03120]
101786057  TATA-box-binding protein 1 [KO:K03120]
101753928  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
101777699  transcription initiation factor TFIID subunit 1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
101767263  transcription initiation factor TFIID subunit 2 [KO:K03128]
101758136  transcription initiation factor TFIID subunit 7 [KO:K03132]
101773421  transcription initiation factor TFIID subunit 8 [KO:K14649]
101775878  transcription initiation factor TFIID subunit 10 [KO:K03134]
101778522  transcription initiation factor TFIID subunit 5 [KO:K03130]
101755708  transcription initiation factor TFIID subunit 4b isoform X2 [KO:K03129]
101761356  transcription initiation factor TFIID subunit 4b isoform X3 [KO:K03129]
101771512  transcription initiation factor TFIID subunit 12b [KO:K03126]
101769642  transcription initiation factor TFIID subunit 12 [KO:K03126]
101778368  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like [KO:K03126]
101777736  transcription initiation factor TFIID subunit 6 [KO:K03131]
101773095  transcription initiation factor TFIID subunit 9 [KO:K03133]
101779823  transcription initiation factor TFIID subunit 9-like [KO:K03133]
101780832  transcription initiation factor TFIID subunit 11 [KO:K03135]
101770036  transcription initiation factor TFIID subunit 13 [KO:K03127]
101760730  general transcription factor IIE subunit 1 isoform X1 [KO:K03136]
101786316  transcription initiation factor IIE subunit alpha [KO:K03136]
101782418  uncharacterized protein LOC101782418 [KO:K03137]
101786967  uncharacterized protein LOC101786967 [KO:K03137]
101759054  uncharacterized protein LOC101759054 [KO:K03137]
101765259  transcription initiation factor IIF subunit alpha isoform X1 [KO:K03138]
101759194  transcription initiation factor IIF subunit alpha [KO:K03138]
101769095  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
101770512  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
101777343  probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [KO:K03141]
101778837  probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [KO:K03141]
101765342  general transcription factor IIH subunit 2 [KO:K03142]
101762736  RNA polymerase II transcription factor B subunit 4 isoform X1 [KO:K03143]
101777488  RNA polymerase II transcription factor B subunit 2 [KO:K03144]
101779540  DNA repair helicase XPB1 isoform X1 [KO:K10843] [EC:5.6.2.4]
101753075  DNA repair helicase XPD [KO:K10844] [EC:5.6.2.3]
101781985  cyclin-dependent kinase D-1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
101774459  uncharacterized protein LOC101774459 [KO:K10842]
101761075  cyclin-H1-1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
sita03020  RNA polymerase
sita03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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