KEGG   PATHWAY: smaf00970
Entry
smaf00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Serratia sp. FGI94
Class
Genetic Information Processing; Translation
Pathway map
smaf00970  Aminoacyl-tRNA biosynthesis
smaf00970

Organism
Serratia sp. FGI94 [GN:smaf]
Gene
D781_3197  tRNA-Ala [KO:K14218]
D781_0235  tRNA-Ala [KO:K14218]
D781_3198  tRNA-Ala [KO:K14218]
D781_3490  tRNA-Ala [KO:K14218]
D781_4429  tRNA-Ala [KO:K14218]
D781_1093  tRNA-Arg [KO:K14219]
D781_0142  tRNA-Arg [KO:K14219]
D781_0797  tRNA-Arg [KO:K14219]
D781_0798  tRNA-Arg [KO:K14219]
D781_0799  tRNA-Arg [KO:K14219]
D781_3179  tRNA-Arg [KO:K14219]
D781_2900  tRNA-Asn [KO:K14220]
D781_2952  tRNA-Asn [KO:K14220]
D781_2925  tRNA-Asn [KO:K14220]
D781_2904  tRNA-Asn [KO:K14220]
D781_0853  tRNA-Asp [KO:K14221]
D781_0878  tRNA-Asp [KO:K14221]
D781_4425  tRNA-Asp [KO:K14221]
D781_1762  tRNA-Cys [KO:K14222]
D781_1143  tRNA-Gln [KO:K14223]
D781_1144  tRNA-Gln [KO:K14223]
D781_1141  tRNA-Gln [KO:K14223]
D781_0273  tRNA-Glu [KO:K14224]
D781_4228  tRNA-Glu [KO:K14224]
D781_4562  tRNA-Glu [KO:K14224]
D781_0849  tRNA-Glu [KO:K14224]
D781_0325  tRNA-Gly [KO:K14225]
D781_0245  tRNA-Gly [KO:K14225]
D781_0326  tRNA-Gly [KO:K14225]
D781_0327  tRNA-Gly [KO:K14225]
D781_1761  tRNA-Gly [KO:K14225]
D781_3633  tRNA-Gly [KO:K14225]
D781_0143  tRNA-His [KO:K14226]
D781_0234  tRNA-Ile [KO:K14227]
D781_4430  tRNA-Ile [KO:K14227]
D781_3491  tRNA-Ile [KO:K14227]
D781_0391  tRNA-Leu [KO:K14228]
D781_0489  tRNA-Leu [KO:K14228]
D781_0593  tRNA-Leu [KO:K14228]
D781_1763  tRNA-Leu [KO:K14228]
D781_1145  tRNA-Leu [KO:K14228]
D781_0144  tRNA-Leu [KO:K14228]
D781_0594  tRNA-Leu [KO:K14228]
D781_0595  tRNA-Leu [KO:K14228]
D781_1204  tRNA-Lys [KO:K14229]
D781_1208  tRNA-Lys [KO:K14229]
D781_1207  tRNA-Lys [KO:K14229]
D781_1209  tRNA-Lys [KO:K14229]
D781_3203  tRNA-Lys [KO:K14229]
D781_1142  tRNA-Met [KO:K14230]
D781_1146  tRNA-Met [KO:K14230]
D781_4024  tRNA-Met [KO:K14230]
D781_0392  tRNA-Met [KO:K14230]
D781_3552  tRNA-Met [KO:K14230]
D781_3551  tRNA-Met [KO:K14230]
D781_3553  tRNA-Met [KO:K14230]
D781_0300  tRNA-Phe [KO:K14231]
D781_3790  tRNA-Phe [KO:K14231]
D781_0101  tRNA-Pro [KO:K14232]
D781_0145  tRNA-Pro [KO:K14232]
D781_3006  tRNA-Pro [KO:K14232]
D781_0796  tRNA-Ser [KO:K14233]
D781_1675  tRNA-Ser [KO:K14233]
D781_2549  tRNA-Ser [KO:K14233]
D781_3049  tRNA-Ser [KO:K14233]
D781_0917  tRNA-Thr [KO:K14234]
D781_4224  tRNA-Thr [KO:K14234]
D781_0246  tRNA-Thr [KO:K14234]
D781_0243  tRNA-Thr [KO:K14234]
D781_3019  tRNA-Thr [KO:K14234]
D781_4424  tRNA-Trp [KO:K14235]
D781_0244  tRNA-Tyr [KO:K14236]
D781_2459  tRNA-Tyr [KO:K14236]
D781_2457  tRNA-Tyr [KO:K14236]
D781_3200  tRNA-Val [KO:K14237]
D781_2048  tRNA-Val [KO:K14237]
D781_2050  tRNA-Val [KO:K14237]
D781_2049  tRNA-Val [KO:K14237]
D781_1206  tRNA-Val [KO:K14237]
D781_3201  tRNA-Val [KO:K14237]
D781_3202  tRNA-Val [KO:K14237]
D781_0076  tRNA-Sec [KO:K14238]
D781_3199  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
D781_3647  amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
D781_1154  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
D781_0793  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
D781_2912  putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain protein [KO:K01872] [EC:6.1.1.7]
D781_2525  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
D781_1637  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
D781_0024  glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
D781_0025  glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
D781_1970  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
D781_1603  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
D781_0042  seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
D781_4117  putative pyridoxal phosphate-dependent enzyme [KO:K01042] [EC:2.9.1.1]
D781_1088  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
D781_1480  protein containing C-terminal region/beta chain of methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
D781_4237  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
D781_0466  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
D781_1124  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
D781_0648  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
D781_3634  lysyl-tRNA synthetase (class II) [KO:K04567] [EC:6.1.1.6]
D781_2536  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
D781_3499  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
D781_3361  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
D781_1976  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
D781_1977  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
D781_2082  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
D781_4319  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
smaf00250  Alanine, aspartate and glutamate metabolism
smaf00260  Glycine, serine and threonine metabolism
smaf00270  Cysteine and methionine metabolism
smaf00290  Valine, leucine and isoleucine biosynthesis
smaf00300  Lysine biosynthesis
smaf00330  Arginine and proline metabolism
smaf00340  Histidine metabolism
smaf00380  Tryptophan metabolism
smaf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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