KEGG   PATHWAY: tng04140
Entry
tng04140                    Pathway                                
Name
Autophagy - animal - Tetraodon nigroviridis (spotted green pufferfish)
Description
Autophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily conserved among eukaryotes and exquisitely regulated. This progress initiates with production of the autophagosome, a double-membrane intracellular structure of reticular origin that engulfs cytoplasmic contents and ultimately fuses with lysosomes for cargo degradation. Autophagy is regulated in response to extra- or intracellular stress and signals such as starvation, growth factor deprivation and ER stress. Constitutive level of autophagy plays an important role in cellular homeostasis and maintains quality control of essential cellular components.
Class
Cellular Processes; Transport and catabolism
Pathway map
tng04140  Autophagy - animal
tng04140

Other DBs
GO: 0006914
Organism
Tetraodon nigroviridis (spotted green pufferfish) [GN:tng]
Gene
GSTEN00014675G001  unnamed protein product [KO:K04526]
GSTEN00008749G001  unnamed protein product [KO:K04526]
GSTEN00035595G001  unnamed protein product [KO:K05087] [EC:2.7.10.1]
GSTEN00022424G001  unnamed protein product [KO:K05087] [EC:2.7.10.1]
GSTEN00022133G001  unnamed protein product [KO:K16172]
GSTEN00005624G001  unnamed protein product [KO:K07187]
GSTEN00019601G001  unnamed protein product [KO:K07187]
GSTEN00026006G001  unnamed protein product [KO:K07187]
GSTEN00004055G001  unnamed protein product [KO:K00922] [EC:2.7.1.153]
GSTEN00014961G001  unnamed protein product [KO:K00922] [EC:2.7.1.153]
GSTEN00006075G001  unnamed protein product [KO:K00922] [EC:2.7.1.153]
GSTEN00026768G001  unnamed protein product [KO:K00922] [EC:2.7.1.153]
GSTEN00028231G001  unnamed protein product [KO:K00922] [EC:2.7.1.153]
GSTEN00013008G001  unnamed protein product [KO:K00922] [EC:2.7.1.153]
GSTEN00013350G001  unnamed protein product [KO:K02649]
GSTEN00034908G001  unnamed protein product [KO:K02649]
GSTEN00019317G001  unnamed protein product [KO:K02649]
GSTEN00020914G001  unnamed protein product [KO:K02649]
GSTEN00006495G001  unnamed protein product [KO:K02649]
GSTEN00024075G001  unnamed protein product [KO:K06276] [EC:2.7.11.1]
GSTEN00003798G001  unnamed protein product [KO:K04456] [EC:2.7.11.1]
GSTEN00016324G001  unnamed protein product [KO:K04456] [EC:2.7.11.1]
GSTEN00009507G001  unnamed protein product [KO:K04456] [EC:2.7.11.1]
GSTEN00007800G001  unnamed protein product [KO:K04456] [EC:2.7.11.1]
GSTEN00024921G001  unnamed protein product [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
GSTEN00011294G001  unnamed protein product [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
GSTEN00003165G001  unnamed protein product [KO:K02833]
GSTEN00021499G001  unnamed protein product [KO:K02833]
GSTEN00022812G001  unnamed protein product [KO:K07827]
GSTEN00014485G001  unnamed protein product [KO:K07831]
GSTEN00017804G001  unnamed protein product [KO:K07830]
GSTEN00023725G001  unnamed protein product [KO:K04366] [EC:2.7.11.1]
GSTEN00016020G001  unnamed protein product [KO:K04368] [EC:2.7.12.2]
GSTEN00004843G001  unnamed protein product [KO:K04369] [EC:2.7.12.2]
GSTEN00028566G001  unnamed protein product [KO:K04371] [EC:2.7.11.24]
GSTEN00021811G001  unnamed protein product [KO:K04371] [EC:2.7.11.24]
GSTEN00032216G001  unnamed protein product [KO:K08268]
GSTEN00032217G001  unnamed protein product [KO:K08268]
GSTEN00013040G001  unnamed protein product [KO:K08268]
GSTEN00026281G001  unnamed protein product [KO:K07207]
GSTEN00001765G001  unnamed protein product [KO:K07206]
GSTEN00011449G001  unnamed protein product [KO:K07206]
GSTEN00006133G001  unnamed protein product [KO:K07206]
GSTEN00024948G001  unnamed protein product [KO:K15464]
GSTEN00026677G001  unnamed protein product [KO:K15464]
GSTEN00027260G001  unnamed protein product [KO:K07208]
GSTEN00032495G001  unnamed protein product [KO:K07204]
GSTEN00032496G001  unnamed protein product [KO:K07204]
GSTEN00018313G001  unnamed protein product [KO:K20402]
GSTEN00010448G001  unnamed protein product [KO:K07203] [EC:2.7.11.1]
GSTEN00000150G001  unnamed protein product [KO:K16184]
GSTEN00011661G001  unnamed protein product [KO:K16184]
GSTEN00024190G001  unnamed protein product [KO:K08266]
GSTEN00033024G001  unnamed protein product [KO:K04688] [EC:2.7.11.1]
GSTEN00005029G001  unnamed protein product [KO:K04688] [EC:2.7.11.1]
GSTEN00021904G001  unnamed protein product [KO:K04688] [EC:2.7.11.1]
GSTEN00037160G001  unnamed protein product [KO:K17606]
GSTEN00034910G001  unnamed protein product [KO:K04382] [EC:3.1.3.16]
GSTEN00004657G001  unnamed protein product [KO:K04382] [EC:3.1.3.16]
GSTEN00029892G001  unnamed protein product [KO:K04382] [EC:3.1.3.16]
GSTEN00011656G001  unnamed protein product [KO:K21357] [EC:2.7.11.1]
GSTEN00026864G001  unnamed protein product [KO:K08269] [EC:2.7.11.1]
GSTEN00007134G001  unnamed protein product [KO:K08331]
GSTEN00016297G001  unnamed protein product [KO:K19730]
GSTEN00016172G001  unnamed protein product [KO:K17589]
GSTEN00032303G001  unnamed protein product [KO:K17906]
GSTEN00031188G001  unnamed protein product [KO:K17906]
GSTEN00007294G001  unnamed protein product [KO:K17908]
GSTEN00024131G001  unnamed protein product [KO:K17908]
GSTEN00019390G001  unnamed protein product [KO:K22991]
GSTEN00025343G001  unnamed protein product [KO:K22991]
GSTEN00016155G001  unnamed protein product [KO:K17907]
GSTEN00031959G001  unnamed protein product [KO:K17907]
GSTEN00018872G001  unnamed protein product [KO:K21245]
GSTEN00011896G001  unnamed protein product [KO:K23611]
GSTEN00015749G001  unnamed protein product [KO:K23611]
GSTEN00025226G001  unnamed protein product [KO:K23610]
GSTEN00010280G001  unnamed protein product [KO:K23609]
GSTEN00027746G001  unnamed protein product [KO:K07901]
GSTEN00005692G001  unnamed protein product [KO:K07925]
GSTEN00018644G001  unnamed protein product [KO:K07925]
GSTEN00004418G001  unnamed protein product [KO:K14381]
GSTEN00005064G001  unnamed protein product [KO:K05410] [EC:2.7.11.10]
GSTEN00004742G001  unnamed protein product [KO:K07874]
GSTEN00007818G001  unnamed protein product [KO:K07874]
GSTEN00022210G001  unnamed protein product [KO:K16185]
GSTEN00007960G001  unnamed protein product [KO:K16186]
GSTEN00015778G001  unnamed protein product [KO:K16186]
GSTEN00011618G001  unnamed protein product [KO:K16186]
GSTEN00028502G001  unnamed protein product [KO:K07298] [EC:2.7.11.1]
GSTEN00014369G001  unnamed protein product [KO:K07198] [EC:2.7.11.31]
GSTEN00012912G001  unnamed protein product [KO:K07198] [EC:2.7.11.31]
GSTEN00019760G001  unnamed protein product [KO:K04345] [EC:2.7.11.11]
GSTEN00026232G001  unnamed protein product [KO:K04345] [EC:2.7.11.11]
GSTEN00022860G001  unnamed protein product [KO:K04345] [EC:2.7.11.11]
GSTEN00016205G001  unnamed protein product [KO:K04345] [EC:2.7.11.11]
GSTEN00004810G001  unnamed protein product [KO:K06068] [EC:2.7.11.13]
GSTEN00027270G001  unnamed protein product [KO:K06068] [EC:2.7.11.13]
GSTEN00019882G001  unnamed protein product [KO:K04440] [EC:2.7.11.24]
GSTEN00014434G001  unnamed protein product [KO:K04440] [EC:2.7.11.24]
GSTEN00030625G001  unnamed protein product [KO:K04440] [EC:2.7.11.24]
GSTEN00020506G001  unnamed protein product [KO:K04570]
GSTEN00008621G001  unnamed protein product [KO:K04570]
GSTEN00014059G001  unnamed protein product [KO:K04570]
GSTEN00025871G001  unnamed protein product [KO:K02158]
GSTEN00021800G001  unnamed protein product [KO:K08334]
GSTEN00003826G001  unnamed protein product [KO:K08333] [EC:2.7.11.1]
GSTEN00035261G001  unnamed protein product [KO:K00914] [EC:2.7.1.137]
GSTEN00000969G001  unnamed protein product [KO:K17889]
GSTEN00003608G001  unnamed protein product [KO:K17889]
GSTEN00018197G001  unnamed protein product [KO:K03175] [EC:2.3.2.27]
GSTEN00006208G001  unnamed protein product [KO:K21247]
GSTEN00005027G001  unnamed protein product [KO:K21248]
GSTEN00000361G001  unnamed protein product [KO:K21248]
GSTEN00005879G001  unnamed protein product [KO:K21249]
GSTEN00035114G001  unnamed protein product [KO:K11248]
GSTEN00028954G001  unnamed protein product [KO:K19330]
GSTEN00009545G001  unnamed protein product [KO:K07359] [EC:2.7.11.17]
GSTEN00010129G001  unnamed protein product [KO:K04427] [EC:2.7.11.25]
GSTEN00001565G001  unnamed protein product [KO:K08852] [EC:2.7.11.1 3.1.26.-]
GSTEN00033402G001  unnamed protein product [KO:K08852] [EC:2.7.11.1 3.1.26.-]
GSTEN00014091G001  unnamed protein product [KO:K04958]
GSTEN00027768G001  unnamed protein product [KO:K08803] [EC:2.7.11.1]
GSTEN00027770G001  unnamed protein product [KO:K08803] [EC:2.7.11.1]
GSTEN00029091G001  unnamed protein product [KO:K08803] [EC:2.7.11.1]
GSTEN00005203G001  unnamed protein product [KO:K08803] [EC:2.7.11.1]
GSTEN00015991G001  unnamed protein product [KO:K08803] [EC:2.7.11.1]
GSTEN00030162G001  unnamed protein product [KO:K10802]
GSTEN00019977G001  unnamed protein product [KO:K08860] [EC:2.7.11.1]
GSTEN00032391G001  unnamed protein product [KO:K16196] [EC:2.7.11.1]
GSTEN00022999G001  unnamed protein product [KO:K03237]
GSTEN00021609G001  unnamed protein product [KO:K18082] [EC:3.1.3.48 3.1.3.64 3.1.3.95]
GSTEN00016272G001  unnamed protein product [KO:K18082] [EC:3.1.3.48 3.1.3.64 3.1.3.95]
GSTEN00004651G001  unnamed protein product [KO:K18086] [EC:3.1.3.64 3.1.3.95]
GSTEN00026794G001  unnamed protein product [KO:K17603]
GSTEN00026795G001  unnamed protein product [KO:K17603]
GSTEN00032362G001  unnamed protein product [KO:K17603]
GSTEN00020701G001  unnamed protein product [KO:K17603]
GSTEN00015434G001  unnamed protein product [KO:K08336]
GSTEN00009397G001  unnamed protein product [KO:K08339]
GSTEN00021121G001  unnamed protein product [KO:K17890]
GSTEN00005155G001  unnamed protein product [KO:K17888]
GSTEN00030511G001  unnamed protein product [KO:K04724]
GSTEN00027946G001  unnamed protein product [KO:K07920]
GSTEN00023216G001  unnamed protein product [KO:K07920]
GSTEN00019189G001  unnamed protein product [KO:K07920]
GSTEN00004220G001  unnamed protein product [KO:K08341]
GSTEN00016825G001  unnamed protein product [KO:K08341]
GSTEN00015793G001  unnamed protein product [KO:K08341]
GSTEN00019225G001  unnamed protein product [KO:K08341]
GSTEN00004007G001  unnamed protein product [KO:K10435]
GSTEN00008303G001  unnamed protein product [KO:K10435]
GSTEN00031163G001  unnamed protein product [KO:K10435]
GSTEN00004881G001  unnamed protein product [KO:K08342] [EC:3.4.22.-]
GSTEN00007884G001  unnamed protein product [KO:K08342] [EC:3.4.22.-]
GSTEN00033581G001  unnamed protein product [KO:K08342] [EC:3.4.22.-]
GSTEN00007040G001  unnamed protein product [KO:K17987]
GSTEN00026932G001  unnamed protein product [KO:K17987]
GSTEN00013257G001  unnamed protein product [KO:K19946]
GSTEN00017473G001  unnamed protein product [KO:K21347]
GSTEN00034121G001  unnamed protein product [KO:K21347]
GSTEN00028587G001  unnamed protein product [KO:K22262]
GSTEN00038458G001  unnamed protein product [KO:K02927]
GSTEN00019300G001  unnamed protein product [KO:K02927]
GSTEN00034593G001  unnamed protein product [KO:K02977]
GSTEN00028639G001  unnamed protein product [KO:K08509]
GSTEN00025260G001  unnamed protein product [KO:K08512]
GSTEN00028616G001  unnamed protein product [KO:K08516]
GSTEN00020697G001  unnamed protein product [KO:K08488]
GSTEN00028649G001  unnamed protein product [KO:K23883]
GSTEN00026949G001  unnamed protein product [KO:K23282]
GSTEN00016335G001  unnamed protein product [KO:K20179]
GSTEN00020068G001  unnamed protein product [KO:K20180]
GSTEN00020704G001  unnamed protein product [KO:K20181]
GSTEN00019926G001  unnamed protein product [KO:K20183]
GSTEN00031796G001  unnamed protein product [KO:K20184]
GSTEN00010001G001  unnamed protein product [KO:K10586] [EC:2.3.2.23]
GSTEN00015109G001  unnamed protein product [KO:K26797]
GSTEN00015072G001  unnamed protein product [KO:K26797]
GSTEN00027277G001  unnamed protein product [KO:K07897]
GSTEN00020976G001  unnamed protein product [KO:K07897]
GSTEN00017942G001  unnamed protein product [KO:K06528]
GSTEN00006405G001  unnamed protein product [KO:K01379] [EC:3.4.23.5]
GSTEN00002939G001  unnamed protein product [KO:K01379] [EC:3.4.23.5]
GSTEN00002940G001  unnamed protein product [KO:K01379] [EC:3.4.23.5]
GSTEN00021670G001  unnamed protein product [KO:K01379] [EC:3.4.23.5]
GSTEN00003269G001  unnamed protein product [KO:K01365] [EC:3.4.22.15]
GSTEN00002393G001  unnamed protein product [KO:K01365] [EC:3.4.22.15]
GSTEN00002914G001  unnamed protein product [KO:K01365] [EC:3.4.22.15]
GSTEN00029092G001  unnamed protein product [KO:K01365] [EC:3.4.22.15]
GSTEN00032075G001  unnamed protein product [KO:K01365] [EC:3.4.22.15]
GSTEN00032819G001  unnamed protein product [KO:K01363] [EC:3.4.22.1]
Compound
C00035  GDP
C00044  GTP
C00350  Phosphatidylethanolamine
C01194  1-Phosphatidyl-D-myo-inositol
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Meijer AJ, Codogno P.
  Title
Regulation and role of autophagy in mammalian cells.
  Journal
Int J Biochem Cell Biol 36:2445-62 (2004)
DOI:10.1016/j.biocel.2004.02.002
Reference
  Authors
Deretic V.
  Title
Autophagy in innate and adaptive immunity.
  Journal
Trends Immunol 26:523-8 (2005)
DOI:10.1016/j.it.2005.08.003
Reference
  Authors
Levine B, Yuan J.
  Title
Autophagy in cell death: an innocent convict?
  Journal
J Clin Invest 115:2679-88 (2005)
DOI:10.1172/JCI26390
Reference
  Authors
Tanida I, Ueno T, Kominami E.
  Title
LC3 conjugation system in mammalian autophagy.
  Journal
Int J Biochem Cell Biol 36:2503-18 (2004)
DOI:10.1016/j.biocel.2004.05.009
Reference
  Authors
Lum JJ, DeBerardinis RJ, Thompson CB.
  Title
Autophagy in metazoans: cell survival in the land of plenty.
  Journal
Nat Rev Mol Cell Biol 6:439-48 (2005)
DOI:10.1038/nrm1660
Reference
  Authors
Reggiori F, Klionsky DJ.
  Title
Autophagosomes: biogenesis from scratch?
  Journal
Curr Opin Cell Biol 17:415-22 (2005)
DOI:10.1016/j.ceb.2005.06.007
Reference
  Authors
Klionsky DJ, Emr SD.
  Title
Autophagy as a regulated pathway of cellular degradation.
  Journal
Science 290:1717-21 (2000)
DOI:10.1126/science.290.5497.1717
Reference
  Authors
Bechet D, Tassa A, Taillandier D, Combaret L, Attaix D.
  Title
Lysosomal proteolysis in skeletal muscle.
  Journal
Int J Biochem Cell Biol 37:2098-114 (2005)
DOI:10.1016/j.biocel.2005.02.029
Reference
  Authors
He C, Klionsky DJ
  Title
Regulation mechanisms and signaling pathways of autophagy.
  Journal
Annu Rev Genet 43:67-93 (2009)
DOI:10.1146/annurev-genet-102808-114910
Reference
  Authors
Yang Z, Klionsky DJ
  Title
An overview of the molecular mechanism of autophagy.
  Journal
Curr Top Microbiol Immunol 335:1-32 (2009)
DOI:10.1007/978-3-642-00302-8_1
Reference
  Authors
Yang Z, Klionsky DJ
  Title
Mammalian autophagy: core molecular machinery and signaling regulation.
  Journal
Curr Opin Cell Biol 22:124-31 (2010)
DOI:10.1016/j.ceb.2009.11.014
Reference
  Authors
Chen Y, Klionsky DJ
  Title
The regulation of autophagy - unanswered questions.
  Journal
J Cell Sci 124:161-70 (2011)
DOI:10.1242/jcs.064576
Reference
  Authors
Mizushima N, Yoshimori T, Ohsumi Y
  Title
The role of Atg proteins in autophagosome formation.
  Journal
Annu Rev Cell Dev Biol 27:107-32 (2011)
DOI:10.1146/annurev-cellbio-092910-154005
Reference
  Authors
Russell RC, Yuan HX, Guan KL
  Title
Autophagy regulation by nutrient signaling.
  Journal
Cell Res 24:42-57 (2014)
DOI:10.1038/cr.2013.166
Reference
  Authors
Noda NN, Fujioka Y
  Title
Atg1 family kinases in autophagy initiation.
  Journal
Cell Mol Life Sci 72:3083-96 (2015)
DOI:10.1007/s00018-015-1917-z
Related
pathway
tng04010  MAPK signaling pathway
tng04141  Protein processing in endoplasmic reticulum
tng04142  Lysosome
tng04150  mTOR signaling pathway
tng04910  Insulin signaling pathway
KO pathway
ko04140   
LinkDB

DBGET integrated database retrieval system