Pseudomonas fluorescens A506: PflA506_1033
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Entry
PflA506_1033 CDS
T02114
Symbol
hupN
Name
(GenBank) DNA-binding protein HU, nu subunit
KO
K03530
DNA-binding protein HU-beta
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_1033 (hupN)
03036 Chromosome and associated proteins [BR:
pfc03036
]
PflA506_1033 (hupN)
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_1033 (hupN)
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PflA506_1033 (hupN)
Chromosome and associated proteins [BR:
pfc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PflA506_1033 (hupN)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PflA506_1033 (hupN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
AFJ56073
LinkDB
All DBs
Position
1166177..1166458
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AA seq
93 aa
AA seq
DB search
MAITKDQLIADLAEAVDAPKTTVRALLDQLSQVVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaccaactgatcgctgacctggctgaagcagtagacgcaccgaaa
actaccgtgcgtgctctgctggaccaactgagccaagttgttgctgatcagctggaaaat
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggctaaaggcctgaccgacgctgttaacaagtaa
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