Pseudomonas fluorescens A506: PflA506_5112
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Entry
PflA506_5112 CDS
T02114
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PflA506_5112 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfc03019
]
PflA506_5112 (rppH)
Messenger RNA biogenesis [BR:
pfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PflA506_5112 (rppH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AFJ55743
LinkDB
All DBs
Position
complement(5607876..5608355)
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcggcattattctgacgaatgatgccgga
caggtgctatgggctcgccgaatcaaccaagatgcctggcagtttcctcaaggtggaatc
aaccccgacgaaacccctgaagacgccttgtaccgtgagttgaacgaagaagtcggcctt
gagcgcgaagatgtacaaattctggcctgtacccgtggctggttgcgctatcgtttgccg
caacgcctggtgcgtacccacagccaaccgctgtgcatcggccagaagcagaaatggttt
cttttgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagctattggtatccgttgggccaggtggtgacattcaag
cgcgaggtttatcgtcgcgctctcaaagagcttgccccgcgccttttagcgcgcgactga
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