Pseudomonas germanica: J0G10_24325
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Entry
J0G10_24325 CDS
T08191
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pgf
Pseudomonas germanica
Pathway
pgf01501
beta-Lactam resistance
pgf02020
Two-component system
Module
pgf_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0G10_24325
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J0G10_24325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgf02000
]
J0G10_24325
01504 Antimicrobial resistance genes [BR:
pgf01504
]
J0G10_24325
Transporters [BR:
pgf02000
]
Other transporters
Pores ion channels [TC:
1
]
J0G10_24325
Antimicrobial resistance genes [BR:
pgf01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
J0G10_24325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QYY80812
LinkDB
All DBs
Position
5475511..5476857
Genome browser
AA seq
448 aa
AA seq
DB search
MRVMKWSMIALAVAAAASTQVATAAPFVSDQAEAKGFVEDAKFDVLLRNYYFNRDRKAGS
NDQRDWTQGFLSNFSSGYTQGTVGVGVDAFGYLGIKLDGGDGTTGSGNTSLDSQGHANDS
LGKAGAAIKARISKTELKFGEFQPSTAPVFAVGGSRLIPQTATGFQLQSSEIDNLDLEAG
HFYSASSQDEMNSDGELHSQYSSTGENPVTGKTMDFAGGKYGITENLSVSLYGSKFKDIW
NQYYSNVNLTTPISGDTSLNTDFNIYRTTDSGDSKAGDISNTTFSLATALSFLKAHTVTL
AFQKVNGDTPFDYVGVGDNNRGGDSIFLANSIQYSDFNGPNEKSAQIRYDLKMAEYGVPG
LSFMTRYVKGWDIDGTKMDASSPYNSYGYGEDGKHHETNLEAKYVVQAGPAKDLSFRIRQ
AWHRGNADQAEGDINEFRLIVDYPLSIL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggcagttgctgcagcagccagtactcaa
gtggcaacggccgccccgtttgtaagtgaccaggctgaagccaaaggttttgttgaagac
gcgaagtttgatgtgttgctgcgcaactattacttcaaccgagacagaaaagccggatca
aacgatcagcgagactggactcaaggtttcctgagcaacttcagctccggttacacccaa
ggtaccgtcggcgtgggtgttgatgcgttcggctacctgggcatcaaactggatggtggc
gatggcaccacaggttcgggcaacaccagcctcgactcccaaggtcatgccaacgactcc
ctcggtaaagcaggcgcagcgatcaaggcccgcatctccaagaccgagctgaaattcggc
gagttccagccaagcaccgctccagtcttcgccgttggcggctcccgtctgattcctcag
accgcaaccggtttccaactgcaaagcagcgaaatcgacaacctggatctggaagcaggc
cacttctactcggcctccagccaggacgagatgaacagcgatggtgagttgcactcgcag
tactccagcaccggtgaaaaccctgtcaccggcaaaaccatggactttgccggtggtaaa
tacggcatcaccgagaacctgagcgtctcgctctacggttcgaagttcaaggatatctgg
aaccagtactacagcaacgtgaacctcaccaccccgatcagtggtgacacttcgctgaac
accgacttcaatatctaccgcaccactgacagtggcgattccaaagccggtgacatcagc
aacaccacgttctctctggcaactgcgctctcgttcctgaaagcacacaccgtgactctg
gccttccagaaggtcaatggtgatacgccgttcgactacgtcggcgtgggtgacaacaac
cgtggtggcgactcgatcttcctggctaactccatccagtactccgacttcaacggccct
aacgaaaaatctgcacagattcgttacgacctgaaaatggccgagtacggcgttccgggc
ctgagcttcatgacccgttacgtaaaaggttgggacatcgacggcaccaaaatggacgcc
agcagcccatacaactcttacggttacggcgaagatggcaagcatcacgaaaccaacctt
gaagccaaatacgtagttcaggccggccctgccaaagacctgtccttccgtattcgtcaa
gcatggcaccgtggcaacgccgaccaggctgaaggcgatatcaacgagttccgcctgatc
gtcgactacccactgtcgatcttgtaa
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