KEGG   Paenibacillus graminis: PGRAT_20915
Entry
PGRAT_20915       CDS       T03325                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pgm  Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:pgm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgm03032]
    PGRAT_20915
   03036 Chromosome and associated proteins [BR:pgm03036]
    PGRAT_20915
   03400 DNA repair and recombination proteins [BR:pgm03400]
    PGRAT_20915
DNA replication proteins [BR:pgm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PGRAT_20915
Chromosome and associated proteins [BR:pgm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PGRAT_20915
DNA repair and recombination proteins [BR:pgm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PGRAT_20915
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: AIQ69820
UniProt: A0A089MBT6
LinkDB
Position
complement(4647363..4647635)
AA seq 90 aa
MNKSDLINVVTEATELPKKDATKAVDAVFEAITGALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKVPAFKPGKALKDGIK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatcagatttgatcaacgtggttacagaagcaactgaacttcccaagaaagat
gctactaaagcggtagatgccgttttcgaagcgatcacaggtgctctgcaaaacggagat
aaagttcagctggtaggattcggaaactttgaagtgcgcgaacgttccgcacgtaaaggc
cgcaacccgcaaactggtgaagaaatcgaaattccttcgagcaaggtaccggcattcaaa
ccgggtaaagctctgaaagacggaatcaaatag

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