Paenibacillus graminis: PGRAT_20915
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Entry
PGRAT_20915 CDS
T03325
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgm03032
]
PGRAT_20915
03036 Chromosome and associated proteins [BR:
pgm03036
]
PGRAT_20915
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_20915
DNA replication proteins [BR:
pgm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PGRAT_20915
Chromosome and associated proteins [BR:
pgm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PGRAT_20915
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PGRAT_20915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AIQ69820
UniProt:
A0A089MBT6
LinkDB
All DBs
Position
complement(4647363..4647635)
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AA seq
90 aa
AA seq
DB search
MNKSDLINVVTEATELPKKDATKAVDAVFEAITGALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKVPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagatttgatcaacgtggttacagaagcaactgaacttcccaagaaagat
gctactaaagcggtagatgccgttttcgaagcgatcacaggtgctctgcaaaacggagat
aaagttcagctggtaggattcggaaactttgaagtgcgcgaacgttccgcacgtaaaggc
cgcaacccgcaaactggtgaagaaatcgaaattccttcgagcaaggtaccggcattcaaa
ccgggtaaagctctgaaagacggaatcaaatag
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