Proteus hauseri: PH4a_11200
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Entry
PH4a_11200 CDS
T05854
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
phau
Proteus hauseri
Brite
KEGG Orthology (KO) [BR:
phau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phau03016
]
PH4a_11200
Enzymes [BR:
phau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PH4a_11200
Transfer RNA biogenesis [BR:
phau03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PH4a_11200
Prokaryotic type
tRNA splicing ligases
PH4a_11200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
CHDCT2
DUF4402
Motif
Other DBs
NCBI-ProteinID:
QAV23875
UniProt:
A0A410XBG7
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All DBs
Position
2469290..2470513
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AA seq
407 aa
AA seq
DB search
MKQDHQLVQSVDTADIKMWTNGVPVEKDALNQLINTAKMPFIFKHMAVMPDVHLGKGSTI
GSVIPTKGAIIPAAVGVDIGCGMIAVRTSLHANDLPDNLFAIRTAIEKAVPHGRTSTRSG
NDRGAWYQPPEIVDQHWQQLEGRFKVLTDKYPRLLKTNNYHHLGTLGTGNHFIELCLDEV
DNVWVMLHSGSRGVGNAIGTLFIQMAQEDMREHLANLPDRNLAYLKEGTLFYDDYIEAVE
WAQDFARHNREIMMERVLAALSSQISKPFSTQQQAVNCHHNYVQKEKHFGEEVLVTRKGA
VSAQKGEMGIIPGSMGAKSFIVRGKGNAESFCSCSHGAGRVMSRTAAKKAFSIEDQIRAT
AHVECRKDEDVIDEIPMAYKDIDAVMKAQSSLVEIVHTLRQVVCVKG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggatcaccaattagtacaatcagtagatacagctgacattaaaatgtggacc
aatggtgttcctgttgaaaaagatgcactaaaccaactgattaatacggctaaaatgcct
tttatctttaaacatatggctgttatgccagatgttcacttaggaaaaggctcaacaata
ggcagtgtgataccaacaaaaggggcgataattcccgcagctgttggggttgatattggt
tgtggcatgattgcagtacgcacatcgttacatgctaatgatttacccgataacttattt
gcgataagaacggcaatagaaaaagcggtacctcatggaagaacaagcactcgttcagga
aatgatcgtggagcttggtatcagccgccagaaattgttgaccaacactggcagcaatta
gaagggcgttttaaggtattgacggataaatatcctcgtttattgaaaacgaataactat
catcaccttggcacattaggaaccggaaatcattttattgagttatgtcttgatgaagtt
gataacgtttgggtgatgctacatagcggatctcgtggtgtcggtaatgcgataggaaca
ctgtttattcaaatggcgcaagaagatatgcgagagcaccttgctaacctaccagataga
aaccttgcttacttaaaggagggaacgttgttttatgacgattacattgaagctgttgaa
tgggctcaagattttgctcgtcataaccgtgaaatcatgatggaacgtgtgttagcggca
ttatcatcgcaaatcagtaaacctttttcgacacaacaacaggcagtaaattgtcaccat
aactatgtgcaaaaagaaaagcactttggcgaagaagttcttgttacccgaaaaggtgct
gtatcggcacaaaaaggggaaatggggatcattcctggctctatgggggcgaaaagcttc
attgttcgaggaaaaggaaatgcggaaagcttttgttcttgtagccacggtgcaggacgc
gtgatgagccgaacagcggctaaaaaagccttcagtattgaagaccaaattagagcaact
gcgcatgtggaatgtcgtaaagacgaggatgtgattgatgaaatcccaatggcatataaa
gatatcgatgcagtaatgaaagcgcaatcgtcattagtcgaaattgttcatacattgcgt
caggtcgtctgtgttaaaggataa
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