Perognathus longimembris pacificus (Pacific pocket mouse): 125346422
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Entry
125346422 CDS
T08928
Symbol
Sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00600
Sphingolipid metabolism
plop01100
Metabolic pathways
plop04071
Sphingolipid signaling pathway
Module
plop_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125346422 (Sgpl1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
125346422 (Sgpl1)
Enzymes [BR:
plop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
125346422 (Sgpl1)
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
SepSecS
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
125346422
NCBI-ProteinID:
XP_048194909
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Position
2:45642767..45709287
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AA seq
568 aa
AA seq
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MPATDLVMLKAFEPYFEILEAYSTKAKNYVNGHCTKYEPWQLIAWSVTWTLLVVWVYEFI
FQPESLWSRFKKKCFKIIRKMPIIGRKIQEKLNKAKEDINKNMSFLKVDKEYVKTLPSQG
LSAPAILEKLKEYSSMDVLWQEGRASGTVYSGEQKLTELLVQVYGNFAWSNPLHPDVFPG
LRKLEAEIVRMSCSLFNGGPDCCGCVTSGGTESILMACKAYRDLALENGIKTPEIVAPQS
AHAAFDKAANYFGMKIVRVPLNKMMEVDVRAMRRAISKNTAMLVCSTPQFPHGVIDPVCE
VAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKG
SSVLLYSDKKYRSYQFFVGTDWQGGIYASPTIAGSRPGGIVAACWASLMYFGENGYVEAT
KQIIKTTRFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFP
PSIHFCITLVHTQKRVAIQFLKDVRESVTQIMKNPKGKATGMGAIYGMAQATVDRKLVAE
LSSVYLDSLYSTDTVTQGNQMNGSPKPR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgccggccacagaccttgtgatgttgaaggcctttgagccttacttcgagattttggaa
gcatactccaccaaggccaagaactatgtcaatggacattgtaccaaatatgagccctgg
cagctcattgcatggagtgtcacgtggaccctgttggtagtctgggtctatgagtttatt
ttccagccagagagtttatggtcaaggtttaaaaagaaatgctttaaaatcatcaggaag
atgccgattattggtcgcaagatccaagaaaagttgaataaagccaaggaagatatcaat
aagaatatgtccttcttgaaagtggacaaagagtatgtgaaaactctgccctcccagggt
ctgagtgcacctgctattctggagaaactcaaagaatacagctccatggatgtcctctgg
caagaagggagagcctcaggaacagtgtacagtggggagcagaagctcacagagctgctg
gtgcaggtttatggaaattttgcatggagtaatccactgcatccagatgtcttcccagga
ctgcgtaagctagaagcagaaattgtgaggatgagttgctccctgttcaatgggggtcca
gattgctgtgggtgtgtcacttctgggggaacggaaagcatcctaatggcctgcaaagct
tatcgggacctggccttagagaacgggatcaagactccagaaattgtggctccccaaagt
gcccatgctgcatttgacaaagcagccaattactttgggatgaagattgtgcgggttcca
ctgaacaagatgatggaggtggatgtgcgggccatgagaagagccatctccaagaacact
gctatgctcgtctgctccaccccacagtttcctcatggtgtgatagatcctgtctgcgaa
gtggccaagctggctgtcaaatataaaatacctcttcacgtggatgcttgccttgggggc
ttccttattgtgtttatggagaaagctggatacccactggagaagccatttgacttccgg
gtgaaaggtgtgaccagcatttctgctgatacccataagtatggctacgcccctaaaggc
tcatcagtgctgctgtacagtgacaagaagtataggagctaccagttctttgtcggcact
gattggcagggtggcatctatgcttccccaaccattgcaggctcacgacctggtggtatt
gttgcagcctgttgggcttccttgatgtacttcggtgagaacggctatgttgaagctacc
aaacagatcatcaaaaccactcgcttcctcaagtcagagctggaaaatatcaaaggcatc
tttgtttttgggaatccccaactgtcagtcattgcactgggctcccgggactttgatatc
taccgactatctaacttgatgactgctaaggggtggaacctgaaccagttgcagttcccc
cccagcattcatttctgcatcacattagttcatacccagaaacgagtggcaatccagttc
ctaaaagatgtccgggaatctgtcactcaaatcatgaagaatcctaaaggcaaggccaca
ggaatgggtgccatctatggcatggcccaggcaactgttgacaggaagttggttgcagaa
ctttcctcagtctacttggacagcctgtacagtactgacactgtaacccagggcaaccag
atgaatggctctccaaaaccccgctga
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